CI01000027_02419674_02422700


Basic Information

Item Value
gene id CI01000027_02419674_02422700
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2419633 ~ 2423128 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02419674_02422700.mRNA
AAATGAAAAACAGGCAAATAGGAACGGCGGCCGGGGGCACCATGACCAAGAGCACCAGCATCGGCGGGGACATGTGCAGTCTGGAGAAGACTGACGGCAGCCAGTCAGACACGGCCGTGGGCCTGGTGGGAACCGATGTCAAGAAACGCCGCTCCAGCATCGGCGCCAAGATGGCGGCGGTCGTAGGGTTGAGTCGAAAGAGCCGCAGCGCCTCGCAGCTCAGCCAGACAGACTTTTCATGGTTTGCTGTAATTGAGGAGCCTGAGCGTATTGGTGTTGAGTGAGCGGCTGATAAAAACACTTTTAAATTGCCAGTGTGTTTATCCAGAGGTCAGTGGATTTCTTTGCCGTCTGTAGCCCACGCTCGCCCTCTAACCGGCTGGCTCAAGTCTAAATGGTGGCGTGCAGGTAGATCACATGCCTGAAGAAATGAACACAGCTCGTCAGACGGCTCGTGCTCAGCCTGCACATGGCAGGTGGCCGGCAGTGTTTTTAATAAGTTGGGCTGGTTGCCAGGGGCCGTAGCACTCTGTCTTGTCTCGTGGGGTGTGTTCTGTCTTGTCTGCGATGTCTTTTAGCAACCTTCCACTAACAACATTTCTGCTTGCTAAAAGGAGGACAAGCACACAGACCGCAGTTGGTCTTATTTTATCTGAAAGAAATTGTAGTTTATGTTTCTGCATTAAGCTGATGTGTGCAATGTTTTTCAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02419674_02422700.mRNA True 712 mRNA 0.52 2 2419633 2423128

Neighbor

gene id symbol gene type direction distance location
CI01000027_02337884_02402668 RIMS2 coding upstream 16965 2337884 ~ 2402668 (+)
CI01000027_02254195_02308930 NA coding upstream 109547 2253903 ~ 2310086 (+)
CI01000027_02242334_02250969 DCAF13 coding upstream 168445 2242334 ~ 2251188 (+)
CI01000027_02234729_02237937 NA coding upstream 181519 2234729 ~ 2238114 (+)
CI01000027_02230213_02233471 NA coding upstream 186142 2230213 ~ 2233491 (+)
CI01000027_02429134_02451902 RIMS2A, RIMS2 coding downstream 5878 2427563 ~ 2452535 (+)
CI01000027_02455787_02458435 DCSTAMP coding downstream 32025 2455153 ~ 2459044 (+)
CI01000027_02492454_02508459 NA coding downstream 68949 2492077 ~ 2508602 (+)
CI01000027_02530086_02589227 NA coding downstream 106510 2529638 ~ 2589476 (+)
CI01000027_02611537_02740618 ZFPM2, ZFPM2A coding downstream 188409 2611537 ~ 2740618 (+)
G138653 NA non-coding upstream 26983 2386701 ~ 2392650 (+)
G138651 NA non-coding upstream 73868 2341204 ~ 2345765 (+)
G138683 NA non-coding upstream 83983 2331989 ~ 2335650 (+)
G138675 NA non-coding upstream 90523 2326892 ~ 2329110 (+)
G138669 NA non-coding upstream 95574 2271369 ~ 2324059 (+)
G138740 NA non-coding downstream 99378 2522506 ~ 2524556 (+)
G138671 NA non-coding downstream 170939 2594067 ~ 2603016 (+)
G138756 NA non-coding downstream 181508 2604636 ~ 2604853 (+)
G138515 NA other upstream 742773 1664408 ~ 1676860 (+)
G138436 NA other upstream 911817 1506961 ~ 1507816 (+)
G138290 NA other upstream 1420452 995970 ~ 999181 (+)
G138247 NA other upstream 1550058 855388 ~ 893121 (+)
G138238 NA other upstream 1587950 829774 ~ 831683 (+)
G138915 NA other downstream 1061259 3484387 ~ 3486647 (+)
G138953 NA other downstream 1078944 3502072 ~ 3520065 (+)
G140436 NA other downstream 2314270 4737398 ~ 4774262 (+)
G140440 NA other downstream 2357289 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 2625795 5050310 ~ 5055755 (+)

Expression


Co-expression Network