G138104


Basic Information

Item Value
gene id G138104
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 216288 ~ 217000 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU156888
GGAAAATAGAGTTAATGAAAAAATGGTTAAGTAAACTAACAAAAGGTGAACATCTGGATGATATACTCAATATTACAAGGATTTTATTCATTTTTCCCGATTTTTTCGGATTGATGGATTTTACCTTTTGTCGGATGGATGGATGGATGGATGGACTTTTCCATTTTTTCGGATTGGATGGATTTTACATTTTTTTTTTTTTGGATGGATGGATGGATGGATTTTACGTTTTTTTTTAGATGCATGGATTTGACCTTTTTTCGGATGGATGGATGGATGGACTTTACCATTTTTTCGGATGAATTTTACATTCTTTTTTTCAGATGGATGGATTTGACCTTTTTTCGGATGGATGGATGGATGGATTTTACCGTTTTGTTCGGATGGATGGATTGATTTTACAGTTTTTTTGGATGGATGGATGGATGGATTTTACTGTTATTTCGGATGATGGATGGATTTTACTGTTTTTTTTTCCCGGAAGGATTGATGGATGAATGGATGGACTTTACCATTATTTTGGATGGATGGATAAGTTTTACTGTTTTTTCAGACAGATGGATGGATTTTATCGTTTTTCGAATGGATGGATGGATAGATGGATTTTACCTTTTTTCAGATGGATGGATGATGTGTGGATGGACTTTACCATTTTTTTCAGGTTGATGGATGGATGGCTGATTTTACCGTTTTTCGGATGGATGGATGGANNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156888 True 713 lncRNA 0.35 1 216288 217000

Neighbor

gene id symbol gene type direction distance location
CI01000027_00122108_00124986 NA coding upstream 91302 122024 ~ 124986 (+)
CI01000027_00089337_00092919 NA coding upstream 123203 88779 ~ 93085 (+)
CI01000027_00000579_00037786 NA coding upstream 178436 579 ~ 37852 (+)
CI01000027_00229612_00237058 RAD21A, RAD21B, RAD21 coding downstream 12005 229005 ~ 237759 (+)
CI01000027_00238851_00240657 NA coding downstream 21851 238851 ~ 240991 (+)
CI01000027_00250077_00273130 EIF3H coding downstream 32756 249756 ~ 273130 (+)
CI01000027_00365674_00371897 CSMD3 coding downstream 147990 364990 ~ 371996 (+)
CI01000027_00391159_00499309 CSMD3 coding downstream 173683 390683 ~ 499760 (+)
G138094 NA non-coding upstream 18574 196777 ~ 197714 (+)
G138093 NA non-coding upstream 24859 191180 ~ 191429 (+)
G138090 NA non-coding upstream 30015 186050 ~ 186273 (+)
G138077 NA non-coding upstream 63493 152288 ~ 152795 (+)
G138068 NA non-coding upstream 103198 111344 ~ 113090 (+)
G138106 NA non-coding downstream 1123 218123 ~ 218344 (+)
G138107 NA non-coding downstream 1387 218387 ~ 218630 (+)
G138114 NA non-coding downstream 27016 244016 ~ 245308 (+)
G138115 NA non-coding downstream 28883 245883 ~ 247582 (+)
G138030 NA other upstream 116031 39146 ~ 100257 (+)
G138238 NA other downstream 612774 829774 ~ 831683 (+)
G138247 NA other downstream 638388 855388 ~ 893121 (+)
G138290 NA other downstream 778970 995970 ~ 999181 (+)
G138436 NA other downstream 1289961 1506961 ~ 1507816 (+)

Expression


Co-expression Network