G138107


Basic Information

Item Value
gene id G138107
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 218387 ~ 218630 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU156891
TTTTAGAGCAGAATGCTGATCTATGAAAATCCTAACAATTACGACAGGGATTCAGCGCTTGAACCCATAATTATCTAGTGGAACCATGAGTGGAACGGCCCATAATGAGACAATTCTAGAAAAGTTTTTTATTCAGATAGTCAAAACTGTTTGCATGTAACTAATTTTAGCTCCACATTTTAAATAGTCTGATTATGTGATGACAAATCTAGAAGCAGCTAAATGATATCTCTGCTATCTGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156891 True 244 lncRNA 0.35 1 218387 218630

Neighbor

gene id symbol gene type direction distance location
CI01000027_00122108_00124986 NA coding upstream 93401 122024 ~ 124986 (+)
CI01000027_00089337_00092919 NA coding upstream 125302 88779 ~ 93085 (+)
CI01000027_00000579_00037786 NA coding upstream 180535 579 ~ 37852 (+)
CI01000027_00229612_00237058 RAD21A, RAD21B, RAD21 coding downstream 10375 229005 ~ 237759 (+)
CI01000027_00238851_00240657 NA coding downstream 20221 238851 ~ 240991 (+)
CI01000027_00250077_00273130 EIF3H coding downstream 31126 249756 ~ 273130 (+)
CI01000027_00365674_00371897 CSMD3 coding downstream 146360 364990 ~ 371996 (+)
CI01000027_00391159_00499309 CSMD3 coding downstream 172053 390683 ~ 499760 (+)
G138106 NA non-coding upstream 43 218123 ~ 218344 (+)
G138104 NA non-coding upstream 1387 216288 ~ 217000 (+)
G138094 NA non-coding upstream 20673 196777 ~ 197714 (+)
G138093 NA non-coding upstream 26958 191180 ~ 191429 (+)
G138090 NA non-coding upstream 32114 186050 ~ 186273 (+)
G138114 NA non-coding downstream 25386 244016 ~ 245308 (+)
G138115 NA non-coding downstream 27253 245883 ~ 247582 (+)
G138155 NA non-coding downstream 424991 643621 ~ 645451 (+)
CI01000027_00681087_00701456 NA non-coding downstream 431559 681087 ~ 701956 (+)
G138030 NA other upstream 118130 39146 ~ 100257 (+)
G138238 NA other downstream 611144 829774 ~ 831683 (+)
G138247 NA other downstream 636758 855388 ~ 893121 (+)
G138290 NA other downstream 777340 995970 ~ 999181 (+)
G138436 NA other downstream 1288331 1506961 ~ 1507816 (+)

Expression


Co-expression Network