G138491


Basic Information

Item Value
gene id G138491
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1582033 ~ 1582333 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157337
AATGTTACTGCTGTTTGTTAGCTTTCAATATACGGTTTTATCCTGATTAAAGCTTTACTGTAGCATTTTTGTAAAGGTATCATTACATTTATAGCATGAACAACTGTTTGTCCATGAACATAGAAGTTTGTTGAAGTATGCAATAGAATTTAGCTAACTGGCTAGCGAAGCAAAAACGCGTTGGTCTTTGTTTACGTCCTTGATGCAACCAAAAATAGCAACATAATACATTTAAAAGACATGTACAAACAATAAAACATACATACAGTTAGGGGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157337 True 278 lncRNA 0.33 2 1582033 1582333

Neighbor

gene id symbol gene type direction distance location
CI01000027_01572250_01574108 NA coding upstream 7623 1571893 ~ 1574410 (+)
CI01000027_01546280_01571152 NTRK1 coding upstream 10813 1545743 ~ 1571220 (+)
CI01000027_01543335_01543974 NA coding upstream 37804 1543335 ~ 1544229 (+)
CI01000027_01519267_01519711 AFP4, APOA2 coding upstream 62257 1519267 ~ 1519776 (+)
CI01000027_01413155_01416305 NA coding upstream 164375 1413101 ~ 1417658 (+)
CI01000027_01767031_01767683 NA coding downstream 184274 1766607 ~ 1767863 (+)
CI01000027_01811625_01827803 RGL2 coding downstream 227424 1804199 ~ 1828182 (+)
CI01000027_01843365_01850501 FCGR2A coding downstream 261032 1843365 ~ 1850501 (+)
CI01000027_01850735_01853042 NA coding downstream 268402 1850735 ~ 1853513 (+)
CI01000027_01865502_01875022 HPN coding downstream 283169 1865502 ~ 1877374 (+)
G138475 NA non-coding upstream 48611 1532970 ~ 1533422 (+)
G138474 NA non-coding upstream 52107 1529721 ~ 1529926 (+)
G138430 NA non-coding upstream 119214 1461181 ~ 1462819 (+)
G138455 NA non-coding upstream 121577 1460240 ~ 1460456 (+)
G138454 NA non-coding upstream 122049 1459767 ~ 1459984 (+)
G138494 NA non-coding downstream 10942 1593275 ~ 1596468 (+)
G138508 NA non-coding downstream 50491 1632824 ~ 1647449 (+)
G138514 NA non-coding downstream 79552 1661885 ~ 1663849 (+)
G138515 NA non-coding downstream 82958 1664408 ~ 1676860 (+)
G138519 NA non-coding downstream 91303 1673636 ~ 1704490 (+)
G138436 NA other upstream 74217 1506961 ~ 1507816 (+)
G138290 NA other upstream 582852 995970 ~ 999181 (+)
G138247 NA other upstream 712458 855388 ~ 893121 (+)
G138238 NA other upstream 750350 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 1153357 390683 ~ 499760 (+)
G138915 NA other downstream 1902054 3484387 ~ 3486647 (+)
G138953 NA other downstream 1919739 3502072 ~ 3520065 (+)
G140436 NA other downstream 3155065 4737398 ~ 4774262 (+)
G140440 NA other downstream 3198084 4780417 ~ 4785660 (+)

Expression


Co-expression Network