CI01000028_03426799_03428872


Basic Information

Item Value
gene id CI01000028_03426799_03428872
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 3424865 ~ 3430150 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_03426799_03428872.mRNA
CTATAAAGGCCTGTTTTAATTCTGATCTGTAACTCAATGTATTTTCTTGGCCTTGGTCTTTGATGGCATTTTGAGATATGGACCAATCCGATGGTGCGTCTGCTGCTTAGATAAACGAGAAGCTCTGAGGAAAAGTAAAATCATTCATTTTTATGATGGAGTGCTCTGTGAGATCTACTCAAGGACGAGATCTCCATGAATAGTTTTCCAAATGTTCAGTGTGCTGTATGGCCATATGCTCACAGCTGTGAGTGGCCTATTCTTGTGTTCGATGCAATTAGATTTTGAGCAGAATAATTTGGCTGTTTGTAATAGAATCATGTTGGAGTCTAGTTTTATAGAGGTCATAAAAGAAAAGGAACTCATGCCAAATGATAATAAGTTATTACTGGTAAACTTTTAAGAGCAGATGTGTGATTTTAATGTGCGTGTTGGACGGGCTAAAAGTCTTAACACTTGTTGCAAGGGACTCTGGGATATCAGGGAAGGACAGATGCATGAGCAACACATTCTTACTCCCAGGACCCCTTGGCGTCACTTTTTAATGCACAGCTTCAGATCAAGACGCATTTAATTCTTTGCATTTGTAAAAGTAGAAATTATTTTATAAATATTTATACTTTCATAGATATTTTGGAGCACCTAACTCCACCCCAACATGAAACCTACCCACTTCTCAACAATATAAAACATATAACAGGCAAATAAAAGTACAGTCACAGGTATTTATTGCAAAAGCTGAACAAAAAAACATTTGGCAGCACAGCACTGGCCACTGCAGAAGTAATTCACTGTATGCAGCAGAGTAATGTATTCAGAAATGAAAAATCATTTTGTTTTCCTTTGAGGTTTGTTGAAATTCTAGGAGGACAGAGAGTGATTTGAATGTGCATTTGAAAGTGTGGTTTCCAAACAGAGTGGAAAGGACATTGCAGTGATTTCACCAAACAAAAACATTAGTTCATATGATAGCAAAGAGATTCACAGCAGTAAACCTTCTTGAAGAAAACCACAGACTGCAAACAAAATCCAATAAAATCCAACCTGAACATGTTACATGCTAATATGCCCCCTACTGGAGAAACTAACAACTTGCTTAAAGGGTTAGTTCACCCAAAAATGAAAATGTTGTCATTAATTACCCTCATGTCATTCCACACCCGTAATACCTTCATTCATCTTCGTTACACAAATTAAGATATTTTTGATAAAATCTGATTCATTGCCAGCAAGATAATTAACACTTTCAGATGCCCTGAAAGCTACTAAAGACATATTCATGTGACTACAGTGGTTCAACCTTAATGTTATGAAGCGACGAGAATACTTTTTGTGCGCCAAAAAAACAAAATAACGACTTTATTCAACAATATCTAGTGATGGGCGGTTTCAAAACACTGCTTCATGTAGCTTTGAAGCTTTACAAATCTTTTGTTTCGAATCAGTGGTTCGGAGTGTGTATCAAACTGCCAAAGTCACGCCCCCCAGTGGTGAACCATTGAAATTTCGAAACACTTATGACGTAACTTCGTTTACTGAAATCACGTGACTTTGGCAGTTTGATATTGTTGAATAAAGTCGGTATTTTGTTTTTTTGGCGCACAAAAAGTATTCTCATTGCTCAATAACATTAAGGTTGAACCATTGTAGTGGTTCAATGAAGTGATTGATTGACTGGTCCAAGGTAGATAGGTGCTGTGTTCGCAATTGCCCCCTATACCCTCATTCACTATTCCCTACATTACCCCACTAATAGTCCACTAGCCGTTGAGCGTGTATCGGTTGTACACTCGTTATTGCAGTGCATTGTGGGATTGAATGAGTGCACTCAACATCGTCCAGTATGGTTTCGGACACCACTACAAATGGCTGTCCCCTCAAATAGTGCCCTATTTAAGGGTATAGGGGGCTATTTCGGACACAGCCATGGTGTTATGTATAAGGGGAGGTGTTTGAAGGATGACCCCAAACCTTGTTATCTGGACAGTCTTCCAGTGGAGATCGCCCTCGTGACCCTGGCGAATACAGGCCCCAATGTGCCAGAGATCATCCAGCTGCTGGACTGGCGGGACTACCATTACGTCATGATCTTTGAATGTCCCTCTCCTTGTGAGAATTTGTACGATGTTGTGAAGTGTTACATTGGCTGCCTCGATGAGAGCTTAGAACGGCTAGTCATGAGGCAGTTCCAGAAGTTCCTATCATATATACTCCAGAGCTCTCTGTCTTGGATGCCCTGGTACCTGAGCTCCCCAGAGGTTCCTGTCATGGTGTCCCAGAAGTTCCTGCAAGGGCTTCAGCTCTTGAGCTTTCTGTCATGGCTGCCGAGTCCCAGATATTCCTGTCTCTGCCTCTGCTGCCCCAGTGCCAGTGATCCCTGTCATCACTGTTCCAGCTATTTCTTTAACGCCCAGAGGATCCTGTCATGGCTGCCCAAGAGGCTCTCATCATGGCTGCCTGGTCCCAGAAGTTCCAGTCATGGCCACTTGAGAGGTTCTGTGGCCGTTCGAATGCCAGAACTTTTCCGCTCTAGTGTGCCAGAGGTTCCTGTGATGGTTGATACAGAGGTCCATTTACGGTTGCCCCAGAAGGTGCTGTCAGGGGCTCCCCGGTCTCCAAGCTTCGAGTAATGTCAGCTAGGTCCCAGAGCTTCCTGTTATGTTCCCCATGTCTCAGAAGTTCCTGTTGTGACTGCCCCAGAGGTTCCTGCCACATCTGGTGTCACAGCTCCTTGTCTCATCCACCCTGGTTCTGGGATTCTGGGTTTCCATCCAGTCAATAAAATTAAAAAAAGAGAAAATATTTATATAAATATTAATTATATTATATATTATGTTTTCATTTAGCAGATGCACAGAAGTGTCAATGTAGACAGTAAAACACTCTTAATACTGCGTGAACTCAACCAATCAGCATGTTCAGTGCCCAAGTCCCACCCCCAAAAGTTCCTGAACTTTGAAAAAGTACTGCCCTGTGAGCAGGGACTTTCTGAGGGGGGAATTTTTACCCAGAACTTTATTTAGACCCTGGTTCCTGCAGTCGAAACACACCGAGTACCACCCCAAAGTCCCTAGTTCCTGGGGAAAGTTCCTGCGTTGGAAACACGACTTTAGGTATCTGTTCCAAACTCTATTGAGTTACTTACATAGGTTGCATTTTAAAACATCACATGTGCAACGATGCGAAAGCTGTTCTACATGGTAAGATTTCTTTTGGCCAAATTTGAAGACAGCATCAACTTCACAGAGTAGGTTATAGATAATATATAACTCTATTATGCACTGCAACAAGCTCAGAGACAAAATCCAACCTAAGTCAGAGAAATGTTGACTATAAATATAGTTTATTTAATGTTAAAAAATATTGAAATGAAAATAGCTCAGTATAATTATAAAATAACGATTTTATTCTATCAAGCATTACCTGTATTGTAGATTTTCACTACAGGACACAATGATTGTGTGAGTGCACACTTTCTTTTGGTAAGTTTTTGTAAGGCAGTGTAAATGTGGTTCCAATCATTACAAAATACTTACATTACTTCCTGTTTTTGTAAACAAGTTCTTATTGAACTTAAACGCCACAGGCAAAAGCAATTTCCATCATGACCTCTGAACAACTTAAAGGGATAGTTTAACCAACAATGAAAATTCTGCCATCATTTACTCACGGTCATGTCATTCCAAACCATCTACATTTTTTTCTTCTGTGGAATATAAAATAAAATATTTTTAAGAATGTACTGGCAACTTTTTTTCCAAGCTTTCCAAGGACTTTCCATGCTTCAAAAAGGATGCTGTCTTGAAAGTCAACTGTCTATGTAGGCAGTGCATTTTAGAATGGAAGGAATGTTATATTAACTAATTAGCATCCAAGACTGAAAGTATTTATTTGATAATACATTTTTA

Function

NR:

description
serine/threonine-protein kinase Pim-3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_03426799_03428872.mRNA True 3908 mRNA 0.40 4 3424865 3430150

Neighbor

gene id symbol gene type direction distance location
CI01000028_03407831_03417774 NA coding upstream 6299 3407831 ~ 3418566 (+)
CI01000028_03385787_03404112 PRDM10 coding upstream 20649 3385542 ~ 3404216 (+)
CI01000028_03334040_03380006 APLP2 coding upstream 44312 3334040 ~ 3380553 (+)
CI01000028_03243337_03247393 SPRED3 coding upstream 176485 3240956 ~ 3248380 (+)
CI01000028_03232374_03235527 PSD8, PSMD8 coding upstream 189279 3232178 ~ 3235586 (+)
CI01000028_03522456_03524618 NA coding downstream 91819 3521969 ~ 3525207 (+)
CI01000028_03543288_03567292 CDON coding downstream 112003 3542153 ~ 3567666 (+)
CI01000028_03650532_03667920 BCL9L coding downstream 218255 3648405 ~ 3668011 (+)
CI01000028_03677140_03686568 DDX6 coding downstream 244294 3674444 ~ 3686976 (+)
CI01000028_03689833_03704593 TREH coding downstream 259371 3689521 ~ 3704739 (+)
G146617 NA non-coding upstream 380 3424273 ~ 3424485 (+)
G146615 NA non-coding upstream 1262 3423325 ~ 3423603 (+)
G145895 NA non-coding upstream 18660 3405173 ~ 3406205 (+)
G145799 NA non-coding upstream 208439 3214609 ~ 3216426 (+)
G145801 NA non-coding upstream 212448 3209266 ~ 3212417 (+)
G146627 NA non-coding downstream 5672 3435822 ~ 3436115 (+)
G146635 NA non-coding downstream 36445 3466595 ~ 3482489 (+)
G146651 NA non-coding downstream 53018 3483168 ~ 3483393 (+)
G146652 NA non-coding downstream 53297 3483447 ~ 3483716 (+)
G146765 NA non-coding downstream 397334 3827484 ~ 3828821 (+)
G145843 NA other upstream 400645 3023146 ~ 3024220 (+)
CI01000028_00525538_00533862 NA other upstream 2902934 524647 ~ 535245 (+)
G147462 NA other downstream 1528553 4958703 ~ 4989838 (+)
G147636 NA other downstream 1785940 5216090 ~ 5216611 (+)
G147693 NA other downstream 2010304 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 4039742 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 4872097 8302247 ~ 8504940 (+)

Expression


Co-expression Network