CI01000028_03628921_03634707


Basic Information

Item Value
gene id CI01000028_03628921_03634707
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 3628690 ~ 3634879 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_03628921_03634707.mRNA
AGTTTTTTTCCCAGCAAACCCCTGTGACAAACTTCTGGCAACTATTTTCAGCAAACTGTATTTGATTCCCACAAATTAACAGCATGTTTTGTGCAAATAAACAGATTTTGCCAGGGCTGTTACCCATACACTTCATACAATCAATGCAAATCACAGACAAAGGCTAGTTACTATGACGAAAGTTTATGTACACACATACATTGTCAACTGGCTCCTATTTGGCATGGAGATCAAAGGCGGGGACTACTTCACACCGTCTGAACACTTCCCCCCTCCCCGTCGCTCTCTATTTCTGTCTCGCTGTGAGTCTTCCCTCTTCAGTCAGTCCATTGTTCTTCCGCTGCAACAGGCCATTTGTTTTGCAGTTGCCTGTTGTCGTGGGAGTGAGTGCAGTGCAGTCTCGAGTAGAACAAAAGGTTACGAGAGTGCAACTGTCATTTGTGCAAGACAGCAGCAACAGGGACCACGCCTCACTGATGCGTCACAGAAAGCCATCCGAAAAATCTAATCTGTATGATTTTTGTCGAAGTGACTTTGATGATGCAGATGTTTTTTTTTTTTTTGACCAATGAATTCCCATTACTTTTCCAATCAATCGTGGTCATGATATTTATGTCAGTAGACCAGTTATGCAAAATTTTTGAGAGTGACTTTTTGGGAGTCACTCCCAAACTCACAATGGTTTATTTAGTGATAAACATTGTAATATTTTGACATCAAGCTGCTGTCCAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_03628921_03634707.mRNA True 739 mRNA 0.41 4 3628690 3634879

Neighbor

gene id symbol gene type direction distance location
CI01000028_03608674_03621881 NA coding downstream 6781 3607598 ~ 3621909 (-)
CI01000028_03573572_03578958 NA coding downstream 49608 3572138 ~ 3579082 (-)
CI01000028_03526529_03542023 NA coding downstream 86561 3526079 ~ 3542129 (-)
CI01000028_03450349_03490905 NA coding downstream 136396 3449775 ~ 3492294 (-)
CI01000028_03307804_03308097 NA coding downstream 320374 3306644 ~ 3308316 (-)
CI01000028_03669254_03670964 NA coding upstream 34085 3668964 ~ 3671430 (-)
CI01000028_04014641_04074641 NA coding upstream 379594 4014473 ~ 4074813 (-)
CI01000028_04128511_04130775 NA coding upstream 493304 4128183 ~ 4130922 (-)
CI01000028_04161038_04162439 NA coding upstream 526151 4161030 ~ 4163103 (-)
CI01000028_04171026_04177666 NECTIN1, PVRL1B coding upstream 536008 4170887 ~ 4177666 (-)
G146975 NA non-coding downstream 59991 3568450 ~ 3568699 (-)
G146949 NA non-coding downstream 106144 3522327 ~ 3522546 (-)
G146691 NA non-coding downstream 111228 3517252 ~ 3517462 (-)
G146688 NA non-coding downstream 113049 3515422 ~ 3515641 (-)
G146678 NA non-coding downstream 128581 3499857 ~ 3500109 (-)
G147025 NA non-coding upstream 50872 3685751 ~ 3686505 (-)
G147027 NA non-coding upstream 61341 3696220 ~ 3697746 (-)
G147028 NA non-coding upstream 68605 3703484 ~ 3724594 (-)
G147139 NA non-coding upstream 202304 3837183 ~ 3837432 (-)
G147143 NA non-coding upstream 211883 3846762 ~ 3939137 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other downstream 1182377 2441332 ~ 2445596 (-)
G146238 NA other downstream 1468652 2147378 ~ 2160038 (-)
G146190 NA other downstream 1517425 2097570 ~ 2111265 (-)
CI01000028_00474810_00475211 NA other downstream 3153344 473609 ~ 475211 (-)
G144855 NA other downstream 3492814 135392 ~ 137202 (-)
G149329 NA other upstream 3064634 6699513 ~ 6701240 (-)
CI01000028_06969947_06983352 NA other upstream 3335878 6965064 ~ 6984084 (-)
G149474 NA other upstream 3594912 7229791 ~ 7232783 (-)
CI01000028_07527725_07535631 ARPP19 other upstream 3891083 7525962 ~ 7535743 (-)
G149923 NA other upstream 4339689 7974568 ~ 8024244 (-)

Expression


Co-expression Network