G145561


Basic Information

Item Value
gene id G145561
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 2315793 ~ 2319340 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU165398
GATGTCAGCACTTTTGTTGGGGTTGGTGATTTCAGTGAAAGTCAGAGGAGAAACATCGCTCCATTTCGTGAAGGCGATGCTGATAGCTTTGCGGGTATCATCTTTATTCAGTGTGTTGGGGAACTTCGTGATCTTGTAAGTGACGTTGAAATGCTCCCACTTGTATCCCAGTGGGTTGATGGCATAGCGCTTGGATCGGGCCGGACCTCGATGAGACCTCGTGTCCGCAGGTGCCGGTACCTGCACACATGGCTTATGCAGCTGAATACTGGCCACCGTGTGTTTTGTCCACGCAGGCACGGTCACAGCGTTATCCAGCACCATCAGCAACAGCGCGCAGGAGCAGACCCAGCGCATCTTCAAATCGCACACACAACTTCCACTTTTTTACCTTGCACTTTGGGTTTGTGTTTCATCCATAAATTCTTGAGCAAGAAAGTATTTCCACAGAACTAACCGCATCCAGACGCGCGCGCACCCGTGCTGAAGACAGATGTGTCCGCGCGCCTCCGGACAGATTCGCGCGAATGTTTCAGTTGAATCTGTTTAGACTTTATTTAGTGCACTTCTGCCTCTTGCTCTGAACTTTCGCTCTCTCTAGGGCGCAGGAAGAATCCCGCAGGAGCATAAAGCGCCGCCCTGCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165398 True 647 lncRNA 0.52 3 2315793 2319340

Neighbor

gene id symbol gene type direction distance location
CI01000028_02299641_02304780 PCYT1A, PCYT1AB coding upstream 10732 2299402 ~ 2305061 (+)
CI01000028_02211495_02287691 SPTBN4 coding upstream 27745 2211495 ~ 2288048 (+)
CI01000028_02175774_02182966 KCNK6 coding upstream 132333 2175524 ~ 2183460 (+)
CI01000028_02165692_02171949 NA coding upstream 142849 2165692 ~ 2172944 (+)
CI01000028_02146358_02159174 NA coding upstream 156574 2146358 ~ 2159219 (+)
CI01000028_02452520_02473148 CSTF3.S, CSTF3 coding downstream 133180 2452520 ~ 2473601 (+)
CI01000028_02568775_02584510 WT1B coding downstream 249435 2568775 ~ 2584889 (+)
CI01000028_02738747_02743091 NA coding downstream 419143 2738483 ~ 2743091 (+)
CI01000028_02915708_02935354 NA coding downstream 596173 2915513 ~ 2935430 (+)
CI01000028_03053581_03067840 PEX16 coding downstream 734114 3053454 ~ 3068508 (+)
G145515 NA non-coding upstream 120080 2191547 ~ 2195713 (+)
G145519 NA non-coding upstream 125046 2189065 ~ 2190747 (+)
G145544 NA non-coding upstream 127647 2185836 ~ 2188146 (+)
G145556 NA non-coding upstream 179885 2135604 ~ 2135908 (+)
G145494 NA non-coding upstream 227933 2087600 ~ 2087860 (+)
G145522 NA non-coding downstream 16055 2335395 ~ 2336299 (+)
G145571 NA non-coding downstream 27455 2346795 ~ 2347033 (+)
G145572 NA non-coding downstream 27791 2347131 ~ 2347356 (+)
G145541 NA non-coding downstream 67611 2386951 ~ 2387316 (+)
G145510 NA non-coding downstream 84905 2404245 ~ 2408459 (+)
CI01000028_00525538_00533862 NA other upstream 1793862 524647 ~ 535245 (+)
G145843 NA other downstream 703806 3023146 ~ 3024220 (+)
G147462 NA other downstream 2639363 4958703 ~ 4989838 (+)
G147636 NA other downstream 2896750 5216090 ~ 5216611 (+)
G147693 NA other downstream 3121114 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 5150552 7469543 ~ 7471432 (+)

Expression


Co-expression Network