CI01000028_02915708_02935354


Basic Information

Item Value
gene id CI01000028_02915708_02935354
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 2915513 ~ 2935430 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_02915708_02935354.mRNA
ATATTAAAGAGATCTTGTTGATTCCTGCTGACAAAACCAACATAATTAGTAGCCATGTTTTGGAAAACCAACAAATAACCAACTAATGACCATCTCAGACCAGACTTAAGAAGTTCCAAAACACATCTATCGGCTTAAACAAAACTGCCTTTCCTTTAGGCACAAAGGAAAGTGAATTTTGTGCATAGAGGTAAAATGATGAACCAAAATAATGACATCAAAATTAATAAAATAAAACCTAATTGGCACCTCTCAGCTTCCACACTCCGTCTATCATGCCTGTCCCTCGACATTACTGACAAGGGACTTTTGAATGAATCCGATTTAGACGATGAAAATCCCACATGGCTAAAGCTCACGAAAGTAGCAGGAGCATCTAAATCCCTGGAGGTAGATAAAAACCCTCCAGATTTCAACAACCAGACAGACGGCTTCAAAGGAAAACACACAAACATACAGAACAGAACCAAAATACAAATTTCCCTTCTGTCCAAAACATACCTCCAACACAGTTCCCACCGGGCAAGCTCGTCAAACGAGTCCTTAGTCAGCAGTAAATCCCACACTTCCAAGGATTTGGCCCAGCGTGATCTGTCACGCAGTCTCCAGGCAGGAGAAGTAGTGGAGGAAGAGAGTCTGAGTTCATCTGGCAAGCAAAAGACCATGGGGGATTATGGTCTGTTGCCCGAGTCCTCTTTGCAGTTTTCCGCGCAGACAGAAGGCATTATTTTCAGCCGGGCAGCCACAGACGTGCACCATCACAGCAAAGCACTTCATGCTCCAGAAATCGCAGAGCTGCACACGAGCACCAGGAGCTCTGGTCAAATGCAGATAGCACAACCCCCCATGAAGCACCTGCCTCACACATGCGGGGAGCTCTGGCAGAGCTGTGAAAGTGGTCAGTTTGTTGACAGCTGTTTGCCGAGACGGGAGGTATTGATTATATCTTGGGGGTGGTGTGAGGTTGTCTCGGTCTCTCTTAGGACTATCCAACCCCATCCCTCTTTATTCCATCTCTCTCTCTTTGTGCCTTACTGGACAAAGAGAACGCCTCTGGGGAGGATGCTTGCCAATGTCCAGACAAGTGCTGAATATTTGATGCGTCCCCAGTGGCATCGGGAGTCTGTTAATGGCTATCTTTAACATACGACCCCCTAGATCAAAAGCTTGACACTCTCTGTGAACATACCCTATCAATAATGTACCACCGCAGACCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_02915708_02935354.mRNA True 1219 mRNA 0.46 4 2915513 2935430

Neighbor

gene id symbol gene type direction distance location
CI01000028_02738747_02743091 NA coding upstream 172422 2738483 ~ 2743091 (+)
CI01000028_02568775_02584510 WT1B coding upstream 330624 2568775 ~ 2584889 (+)
CI01000028_02452520_02473148 CSTF3.S, CSTF3 coding upstream 441912 2452520 ~ 2473601 (+)
CI01000028_02299641_02304780 PCYT1A, PCYT1AB coding upstream 610452 2299402 ~ 2305061 (+)
CI01000028_02211495_02287691 SPTBN4 coding upstream 627465 2211495 ~ 2288048 (+)
CI01000028_03053581_03067840 PEX16 coding downstream 118024 3053454 ~ 3068508 (+)
CI01000028_03074166_03080440 NA coding downstream 138609 3074039 ~ 3080902 (+)
CI01000028_03097428_03106553 SRPR, SRPRA coding downstream 161998 3097428 ~ 3107528 (+)
CI01000028_03155827_03157194 NA coding downstream 218571 3154001 ~ 3157194 (+)
CI01000028_03232374_03235527 PSD8, PSMD8 coding downstream 296748 3232178 ~ 3235586 (+)
G145700 NA non-coding upstream 148963 2766314 ~ 2766550 (+)
G145697 NA non-coding upstream 154098 2761199 ~ 2761415 (+)
G145682 NA non-coding upstream 169090 2746205 ~ 2746423 (+)
G145643 NA non-coding upstream 181257 2665332 ~ 2734256 (+)
G145641 NA non-coding upstream 252966 2662308 ~ 2662547 (+)
G145776 NA non-coding downstream 10145 2945575 ~ 2945814 (+)
G145778 NA non-coding downstream 13850 2949280 ~ 2949519 (+)
G145780 NA non-coding downstream 19339 2954769 ~ 2955093 (+)
G145781 NA non-coding downstream 26059 2961489 ~ 2961734 (+)
G145784 NA non-coding downstream 33751 2969181 ~ 2969414 (+)
CI01000028_00525538_00533862 NA other upstream 2393582 524647 ~ 535245 (+)
G145843 NA other downstream 87716 3023146 ~ 3024220 (+)
G147462 NA other downstream 2023273 4958703 ~ 4989838 (+)
G147636 NA other downstream 2280660 5216090 ~ 5216611 (+)
G147693 NA other downstream 2505024 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 4534462 7469543 ~ 7471432 (+)

Expression


Co-expression Network