Gene
RNA
| Item | Value |
|---|---|
| gene id | G145643 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000028 |
| NCBI id | null |
| chromosome length | 9874160 |
| location | 2665332 ~ 2734256 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU165494 | True | 291 | lncRNA | 0.35 | 2 | 2665332 | 2734256 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000028_02568775_02584510 | WT1B | coding | upstream | 80443 | 2568775 ~ 2584889 (+) |
| CI01000028_02452520_02473148 | CSTF3.S, CSTF3 | coding | upstream | 191731 | 2452520 ~ 2473601 (+) |
| CI01000028_02299641_02304780 | PCYT1A, PCYT1AB | coding | upstream | 360271 | 2299402 ~ 2305061 (+) |
| CI01000028_02211495_02287691 | SPTBN4 | coding | upstream | 377284 | 2211495 ~ 2288048 (+) |
| CI01000028_02175774_02182966 | KCNK6 | coding | upstream | 481872 | 2175524 ~ 2183460 (+) |
| CI01000028_02738747_02743091 | NA | coding | downstream | 4227 | 2738483 ~ 2743091 (+) |
| CI01000028_02915708_02935354 | NA | coding | downstream | 181257 | 2915513 ~ 2935430 (+) |
| CI01000028_03053581_03067840 | PEX16 | coding | downstream | 319198 | 3053454 ~ 3068508 (+) |
| CI01000028_03074166_03080440 | NA | coding | downstream | 339783 | 3074039 ~ 3080902 (+) |
| CI01000028_03097428_03106553 | SRPR, SRPRA | coding | downstream | 363172 | 3097428 ~ 3107528 (+) |
| G145641 | NA | non-coding | upstream | 2785 | 2662308 ~ 2662547 (+) |
| G145525 | NA | non-coding | upstream | 29380 | 2591897 ~ 2635952 (+) |
| G145621 | NA | non-coding | upstream | 78629 | 2586158 ~ 2586703 (+) |
| G145615 | NA | non-coding | upstream | 98408 | 2566635 ~ 2566924 (+) |
| G145613 | NA | non-coding | upstream | 100307 | 2564806 ~ 2565025 (+) |
| G145682 | NA | non-coding | downstream | 11949 | 2746205 ~ 2746423 (+) |
| G145697 | NA | non-coding | downstream | 26943 | 2761199 ~ 2761415 (+) |
| G145700 | NA | non-coding | downstream | 32058 | 2766314 ~ 2766550 (+) |
| G145729 | NA | non-coding | downstream | 195919 | 2930175 ~ 2931719 (+) |
| G145761 | NA | non-coding | downstream | 199281 | 2933537 ~ 2933791 (+) |
| CI01000028_00525538_00533862 | NA | other | upstream | 2143401 | 524647 ~ 535245 (+) |
| G145843 | NA | other | downstream | 288890 | 3023146 ~ 3024220 (+) |
| G147462 | NA | other | downstream | 2224447 | 4958703 ~ 4989838 (+) |
| G147636 | NA | other | downstream | 2481834 | 5216090 ~ 5216611 (+) |
| G147693 | NA | other | downstream | 2706198 | 5440454 ~ 5453610 (+) |
| CI01000028_07470324_07471346 | NA | other | downstream | 4735636 | 7469543 ~ 7471432 (+) |
