G145641


Basic Information

Item Value
gene id G145641
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 2662308 ~ 2662547 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU165492
ACACTTTACAATAAGCTTCATTAGTTAACATTAGTTAACTACATTAGTTAACATTAACTAATAATGAACTGCACTTATACAGCATTTATTAATCTTTGTTAATGCTAATTTCAACATTTACTAATACATTATTAAAATCTTGTTAACATTAGTTAATGCACTGTGAACTAACATGAACAAACGATGAACAGCTGTATTTTCATTAACTAATGTTAATGAAGATTAGTAAATACAGTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165492 True 240 lncRNA 0.25 1 2662308 2662547

Neighbor

gene id symbol gene type direction distance location
CI01000028_02568775_02584510 WT1B coding upstream 77419 2568775 ~ 2584889 (+)
CI01000028_02452520_02473148 CSTF3.S, CSTF3 coding upstream 188707 2452520 ~ 2473601 (+)
CI01000028_02299641_02304780 PCYT1A, PCYT1AB coding upstream 357247 2299402 ~ 2305061 (+)
CI01000028_02211495_02287691 SPTBN4 coding upstream 374260 2211495 ~ 2288048 (+)
CI01000028_02175774_02182966 KCNK6 coding upstream 478848 2175524 ~ 2183460 (+)
CI01000028_02738747_02743091 NA coding downstream 75936 2738483 ~ 2743091 (+)
CI01000028_02915708_02935354 NA coding downstream 252966 2915513 ~ 2935430 (+)
CI01000028_03053581_03067840 PEX16 coding downstream 390907 3053454 ~ 3068508 (+)
CI01000028_03074166_03080440 NA coding downstream 411492 3074039 ~ 3080902 (+)
CI01000028_03097428_03106553 SRPR, SRPRA coding downstream 434881 3097428 ~ 3107528 (+)
G145525 NA non-coding upstream 26356 2591897 ~ 2635952 (+)
G145621 NA non-coding upstream 75605 2586158 ~ 2586703 (+)
G145615 NA non-coding upstream 95384 2566635 ~ 2566924 (+)
G145613 NA non-coding upstream 97283 2564806 ~ 2565025 (+)
G145599 NA non-coding upstream 139232 2522794 ~ 2523076 (+)
G145643 NA non-coding downstream 2785 2665332 ~ 2734256 (+)
G145682 NA non-coding downstream 83658 2746205 ~ 2746423 (+)
G145697 NA non-coding downstream 98652 2761199 ~ 2761415 (+)
G145700 NA non-coding downstream 103767 2766314 ~ 2766550 (+)
G145729 NA non-coding downstream 267628 2930175 ~ 2931719 (+)
CI01000028_00525538_00533862 NA other upstream 2140377 524647 ~ 535245 (+)
G145843 NA other downstream 360599 3023146 ~ 3024220 (+)
G147462 NA other downstream 2296156 4958703 ~ 4989838 (+)
G147636 NA other downstream 2553543 5216090 ~ 5216611 (+)
G147693 NA other downstream 2777907 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 4807345 7469543 ~ 7471432 (+)

Expression


Co-expression Network