G145784


Basic Information

Item Value
gene id G145784
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 2969181 ~ 2969414 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU165647
ATTTCTGTAGCGCTGTGTCACTTTGATTGACGTCTCCGACATCTCCTGTTATTTGTGGTGGGCTCTGAAAATGACAACTAAGAACGGAGAAACACATAGCTGTCATCTTTAATGAGCATCACTCTGTCTGTATGCCTGATGGATTTCAGGTAAGACACATGCAGTCTCACAATAGATGCTTTCAGAAGATTCAGTCAGAGCACAGTCTCATCCGAGGACAGGCCGAAAGCCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165647 True 234 lncRNA 0.45 1 2969181 2969414

Neighbor

gene id symbol gene type direction distance location
CI01000028_02915708_02935354 NA coding upstream 33751 2915513 ~ 2935430 (+)
CI01000028_02738747_02743091 NA coding upstream 226090 2738483 ~ 2743091 (+)
CI01000028_02568775_02584510 WT1B coding upstream 384292 2568775 ~ 2584889 (+)
CI01000028_02452520_02473148 CSTF3.S, CSTF3 coding upstream 495580 2452520 ~ 2473601 (+)
CI01000028_02299641_02304780 PCYT1A, PCYT1AB coding upstream 664120 2299402 ~ 2305061 (+)
CI01000028_03053581_03067840 PEX16 coding downstream 84040 3053454 ~ 3068508 (+)
CI01000028_03074166_03080440 NA coding downstream 104625 3074039 ~ 3080902 (+)
CI01000028_03097428_03106553 SRPR, SRPRA coding downstream 128014 3097428 ~ 3107528 (+)
CI01000028_03155827_03157194 NA coding downstream 184587 3154001 ~ 3157194 (+)
CI01000028_03232374_03235527 PSD8, PSMD8 coding downstream 262764 3232178 ~ 3235586 (+)
G145781 NA non-coding upstream 7447 2961489 ~ 2961734 (+)
G145780 NA non-coding upstream 14088 2954769 ~ 2955093 (+)
G145778 NA non-coding upstream 19662 2949280 ~ 2949519 (+)
G145776 NA non-coding upstream 23367 2945575 ~ 2945814 (+)
G145761 NA non-coding upstream 35390 2933537 ~ 2933791 (+)
G145786 NA non-coding downstream 2243 2971657 ~ 2971876 (+)
G145787 NA non-coding downstream 3271 2972685 ~ 2973580 (+)
G145792 NA non-coding downstream 15988 2985402 ~ 2985645 (+)
G145842 NA non-coding downstream 51577 3020991 ~ 3021220 (+)
G145843 NA non-coding downstream 53732 3023146 ~ 3024220 (+)
CI01000028_00525538_00533862 NA other upstream 2447250 524647 ~ 535245 (+)
G147462 NA other downstream 1989289 4958703 ~ 4989838 (+)
G147636 NA other downstream 2246676 5216090 ~ 5216611 (+)
G147693 NA other downstream 2471040 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 4500478 7469543 ~ 7471432 (+)

Expression


Co-expression Network