G147608


Basic Information

Item Value
gene id G147608
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 5132294 ~ 5132505 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU167653
AAGAGCTCATGTTAGCAGCACCGATTACCTCAGACTCACTGAAAATGTCAGAAACTGTTCAGCCTTTTATGTTCAAACGGGAGTCGGACAATGATGGAGAAACTCAAGAAGAAGTGACAACATGTAGAATGCAACAGGACGTTTCTGAATGGTTAGTTGATGAATTTATGTAGCTGATGTGGAGTTAACTTAAAGTTATTGATTGCAAATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167653 True 212 lncRNA 0.39 1 5132294 5132505

Neighbor

gene id symbol gene type direction distance location
CI01000028_05120588_05127452 GRK7B coding upstream 3265 5120183 ~ 5129029 (+)
CI01000028_05114584_05116494 RNF7, RBX2 coding upstream 15232 5113518 ~ 5117062 (+)
CI01000028_05039088_05063207 NA coding upstream 69087 5039088 ~ 5063207 (+)
CI01000028_04729544_04888382 CNTN5 coding upstream 243912 4729544 ~ 4888382 (+)
CI01000028_04441930_04444388 TTC36 coding upstream 687814 4441866 ~ 4444480 (+)
CI01000028_05178115_05181202 FZD9B, FZD9 coding downstream 43920 5176425 ~ 5181220 (+)
CI01000028_05488773_05490277 NA coding downstream 354527 5487032 ~ 5490635 (+)
CI01000028_05507920_05512856 ZBTB38 coding downstream 374373 5506878 ~ 5512879 (+)
CI01000028_05513089_05514983 NA coding downstream 380471 5512976 ~ 5515363 (+)
CI01000028_05529016_05564762 RASA2 coding downstream 396511 5529016 ~ 5565685 (+)
G147604 NA non-coding upstream 7877 5124089 ~ 5124417 (+)
G147595 NA non-coding upstream 24351 5107618 ~ 5107943 (+)
G147583 NA non-coding upstream 45300 5086720 ~ 5086994 (+)
G147482 NA non-coding upstream 537529 4587296 ~ 4594765 (+)
G147490 NA non-coding upstream 545182 4583799 ~ 4587112 (+)
G147610 NA non-coding downstream 5092 5137597 ~ 5137899 (+)
G147612 NA non-coding downstream 14993 5147498 ~ 5147963 (+)
G147635 NA non-coding downstream 82720 5215225 ~ 5216022 (+)
G147637 NA non-coding downstream 85788 5218293 ~ 5218541 (+)
G147638 NA non-coding downstream 86527 5219032 ~ 5219351 (+)
G147462 NA other upstream 142456 4958703 ~ 4989838 (+)
G145843 NA other upstream 2108074 3023146 ~ 3024220 (+)
CI01000028_00525538_00533862 NA other upstream 4610363 524647 ~ 535245 (+)
G147636 NA other downstream 83585 5216090 ~ 5216611 (+)
G147693 NA other downstream 307949 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 2337387 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 3169742 8302247 ~ 8504940 (+)
G150398 NA other downstream 3659230 8791735 ~ 8792120 (+)

Expression


Co-expression Network