CI01000029_01007732_01029115


Basic Information

Item Value
gene id CI01000029_01007732_01029115
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1006627 ~ 1029336 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_01007732_01029115.mRNA
ATGGCATACTGTGAACTCTTATTTTGTGTCAGCAGAATAAAAATAATGGCTAATTCGTGTCGGTCACTTCCTACTCCTCGCCTATGGAGGATGGCTCTCCCACCGCAGCTGAAAGCGATCCAGCACCATTTAAGAACAGCACAGGAACACGAGAAAAGAGAACCGGTGGTCGCTTATTACTGTCGACTTTACGCCATGCAGACAGGAATGAAACTAGATAGCAAAACTCCAGAGTGCCGAAAGTTTCTTGTGAAACTAATGGATCAATTGGAAATGATGAAGAAGGAGCTCAGCGACAATGAATCCATCTCGCAGGAAATAGTTGGCAATGCCCATGTTGAGAATTACGCTATAAAAATGTTCCTCTATGCAGACAATGAAGATCGATCAGGACGTTTCCACAAGTCACAGCAGTATAATGAAGCTGTTGTGGACAGTGACGTCATAGGCAGTGCAATGCTGGTAAAGGGTCCAGGAGCTGAATACCTGGCAGTGACTCAGGCCTCAGGTCATACCGACTGGCACTACCCAAGAAATATGATCAAGTCCTTCTACACCTCAAGTCTTCTGTTTGATGTGTTGACTGTCTTTGGCGAATTATCAGAAGAGAACATCCAACACAGGAAGTATGCAAAGTGGAAGGCAGCCTATATCCACAACTGCCTGAAGAATGGTGAGACTCCGCAGCCCGGTCCTATTGGAATGGAGGGGGAAGCATATGAAGAGGGTGTCCCAGGCGATGACATCTTGTTCCCTCTGGATGACGTGTCCAATGGATCCATCGCCTTCTCATGATGATGGTTTCCAAAGTCGTTCTCTGTCATTCTCTAACATTCAGAGCCATAAAGTAGGGTGGAAAGGATGCAGCTCTGGTGCAGTCTCAGTTAAGTGTGGGTTCTATAATGTGAGGACTTTCACACATTGTTCAACATACTAAATGTGTTTCTGGCTTTGCTGAGACGGTTCTTGACGTCACTGCCTGCTCCTCCGTGTGTCAAACGGTGCTGCCCAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_01007732_01029115.mRNA False 1016 mRNA 0.46 9 1007732 1029336

Neighbor

gene id symbol gene type direction distance location
CI01000029_01005595_01007028 CX23, GJE1 coding upstream 540 1005595 ~ 1007192 (+)
CI01000029_00754131_00762051 HECA coding upstream 245383 753841 ~ 762349 (+)
CI01000029_00751587_00751771 ABRACL, CF115 coding upstream 255737 751587 ~ 752779 (+)
CI01000029_00718512_00738422 NCOA1, FAM184A coding upstream 269140 717495 ~ 738592 (+)
CI01000029_00711035_00714680 NA coding upstream 292784 710952 ~ 714948 (+)
CI01000029_01055143_01086742 ADGRG6 coding downstream 25807 1055143 ~ 1087711 (+)
CI01000029_01165267_01171855 NA coding downstream 135518 1164854 ~ 1173919 (+)
CI01000029_01206589_01231131 AIG1 coding downstream 175127 1204463 ~ 1231158 (+)
CI01000029_01259557_01263294 PEX3 coding downstream 229920 1259256 ~ 1263294 (+)
CI01000029_01284636_01285656 NA coding downstream 255300 1284636 ~ 1285958 (+)
G151758 NA non-coding upstream 337969 669485 ~ 669763 (+)
CI01000029_00643229_00643768 SRP09, SRP9 non-coding upstream 363447 642563 ~ 644285 (+)
G151672 NA non-coding upstream 448095 550821 ~ 559637 (+)
G151677 NA non-coding upstream 472146 535067 ~ 535586 (+)
G151977 NA non-coding downstream 333615 1362951 ~ 1363894 (+)
G151982 NA non-coding downstream 415576 1444912 ~ 1445191 (+)
G151991 NA non-coding downstream 426871 1456207 ~ 1456417 (+)
G151996 NA non-coding downstream 432668 1462004 ~ 1462313 (+)
G151997 NA non-coding downstream 435875 1465211 ~ 1465488 (+)
G151495 NA other upstream 635810 366541 ~ 371922 (+)
G151415 NA other upstream 782487 170521 ~ 225245 (+)
CI01000029_01526863_01527414 NA other downstream 497450 1526754 ~ 1527899 (+)
G152451 NA other downstream 1732258 2761594 ~ 2762939 (+)
G153475 NA other downstream 2515789 3545125 ~ 3562004 (+)
G153790 NA other downstream 3704253 4733589 ~ 4740107 (+)
G154587 NA other downstream 4241684 5271020 ~ 5271535 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017513 vta1 coding NC_007131.7 CM002904.2 37300296 ~ 37379578 (+)