G151977


Basic Information

Item Value
gene id G151977
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1362951 ~ 1363894 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU172620
CTCACCTTTGCGACTCCATACAGTTTTGAAGCCATCAGTTCCAAAAACATTTATCTTGGTTTCATCACTCCAGAGTATAGAGTCCCAGTAGTCTTCATCTTTGTCAGCATGGGCCCTGGCGAACTCTATGCGGGCTTTTTTTGTGCCTGGGCTTTAGGAGAGGCTTCTTTCGTGGACGGCACCCATGCATGCCATTCCTCTGCAGTGTATGCCGTATTGTGTCACGGGAAATAGTCACCCCAGTTTGGCTTTCTACTTCTTTAGATAACTGCAGTGAACTTGCATGCCGATTTTCTTCAACCCTTCTCATCAGAAGACGCTCCTGTCGAGGTGTTAACTTCCGTGGACGACCTGGATGTCTCTGTGAGATGGTTGCAGTTCCATCTTTTTTAAATTTTTGTACCACTTTTGCTACAGTATTCTGACTGATAAGTAAAGCTTTGCTGATCTTCTTGTAGCCTTCCCCTTTCTGGTGTAAAGAAATTATTTTCTTTCTCAGGTCTTGTGACATTTCTCTTCCATGTGGTGCCATTGCTGACAGCATGAAATGGGAAGGGGTTTTAACACCCTTTTTATAGTCAACTGTCTGCTGGACACCTGTGTAATGAATAATTAGACTCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172620 True 623 lncRNA 0.44 2 1362951 1363894

Neighbor

gene id symbol gene type direction distance location
CI01000029_01318644_01336634 NA coding upstream 26030 1317774 ~ 1336921 (+)
CI01000029_01304740_01313262 FLVCR1 coding upstream 49686 1302326 ~ 1313265 (+)
CI01000029_01297680_01300190 TATDN3 coding upstream 62705 1297611 ~ 1300246 (+)
CI01000029_01284636_01285656 NA coding upstream 76993 1284636 ~ 1285958 (+)
CI01000029_01259557_01263294 PEX3 coding upstream 99657 1259256 ~ 1263294 (+)
CI01000029_01396098_01435688 GALNT14 coding downstream 31549 1395443 ~ 1436078 (+)
CI01000029_01475527_01497973 EHD3 coding downstream 111036 1474930 ~ 1498068 (+)
CI01000029_01526863_01527414 NA coding downstream 162860 1526754 ~ 1527899 (+)
CI01000029_01533005_01534392 NA coding downstream 168581 1532475 ~ 1534556 (+)
CI01000029_01542500_01557216 C1ORF95, STUM coding downstream 178256 1542150 ~ 1558713 (+)
G151810 NA non-coding upstream 18715 865287 ~ 1344236 (+)
G151904 NA non-coding upstream 354613 1004177 ~ 1004713 (+)
CI01000029_00751587_00751771 ABRACL, CF115 non-coding upstream 610172 751587 ~ 752779 (+)
G151758 NA non-coding upstream 693188 669485 ~ 669763 (+)
CI01000029_00643229_00643768 SRP09, SRP9 non-coding upstream 718666 642563 ~ 644285 (+)
G151982 NA non-coding downstream 81018 1444912 ~ 1445191 (+)
G151991 NA non-coding downstream 92313 1456207 ~ 1456417 (+)
G151996 NA non-coding downstream 98110 1462004 ~ 1462313 (+)
G151997 NA non-coding downstream 101317 1465211 ~ 1465488 (+)
G152002 NA non-coding downstream 109135 1473029 ~ 1473465 (+)
G151495 NA other upstream 991029 366541 ~ 371922 (+)
G151415 NA other upstream 1137706 170521 ~ 225245 (+)
G152451 NA other downstream 1397700 2761594 ~ 2762939 (+)
G153475 NA other downstream 2181231 3545125 ~ 3562004 (+)
G153790 NA other downstream 3369695 4733589 ~ 4740107 (+)
G154587 NA other downstream 3907126 5271020 ~ 5271535 (+)

Expression


Co-expression Network