G151810


Basic Information

Item Value
gene id G151810
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 865287 ~ 1344236 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU172441
AGTTAAAGAGAAGCGGCAGCACGGAGCGCATGTGAACATCCTCTCCACCGCTTTTAATACCAGTTACAGCGCGAAATAAACATGTCTAAACATCTGAAGGTATGTTAAAATACAGTACAACTTACCGAAATCCATATCATGTCTCGTGTAATACCTCAATCAGTGTTTCAACCTCGGAAAGACGACATTTACCTCAGAAAAACATATTCAGTGACCATAAACTCATTAGTCAGCTAGAAAAATGAACTTTAGAAAGCAGCATTCTGATAAATATAGCTATGCACCGTTACATATTCATTATAATGTTCTTCAATATTTAATGCATGTTTGAGTAAATCAGTTATGACAGCCACGATTTAAATGTTCATATTTATAAAAAAAAAAAAAAAAAAAAAAAACGAATTGGAGTAGAAATATGATTATGTAATTCTAAACTTTATTTATTATAAAAAACATAATTGAGTGTAATTTAAGTGTTTGTATATAAATAAGTTAATTTTAACCTTCATTATTATAGTAAAGTAGTACCAACTGACTCCCATGTGTAGTTTACAGCATTAGTTAAGAGATTTTTTTCCTCTAGAAAATTTGCCATGTACTATAACTGATATACTACATCCAAAATAATCGATATCGAATCGAAATCGTAAACGAATTGAATCGCAAGCATGTGATTAGAAATCAAATCGAATCGTGAAAATTGTGACAATACCCAGCCCTACTAAAAATGAAATGCAAATAAAGCTTTAAATAAAAAAATAAAAACGAATAGGTTCCAAAAACCTAATAAAAATGACAAAAGCACATAAATTTACTACAACTTAAACTGAAAACTGAAAATATAAAAATAAAAGCTAATTCAAAATATTAATAAGTACTGTTATGAGAAAGAAGATGAACTTTATGATGAATCAATTCACTAAAATTAATCAGACTTTACATTTTAGTGAATCAGTTTGTCCTAAATGGTCTAATGTTCCAATGTAGTGTTGGAAAGTCCAGTTGATTCAAGTGAATCGGTTCACTAAGATGGTTCATGTAAATGAACAGATTCAGAAAAATGAGTTTCTGATTCAAGTCTCTTTACTATTTTCAGTTCGATTAGGTAGATTTTGTTGTATTTGGTATAAACTTACCTTTTCAGGTTTGACACCCTAATTGAAATGAATTAAATCAAAAAGTTTTTTTTTTGTTATGTTTTAAAATGATGCAAGATTGTCAAGGATGCTTACCTAGCGTATGTTTGTGTTGATAGGCAATTTAAAAATACCACAGCAATGTCCCCTTTGTGTTCTAGCTTGAGCCGTTGAGTTTTGTTTAATCGCATGTACTGTAGCGCTGCTAATGACATGTCTAAAACAGAACTCTTGATTGTTGTGTTTTACAATGCTGTAATTGTTTAGTCAATCTAATGCACCTCTCAGATGAGACGCTGAACCGCACATGGCATGAAATGATACCAAAGTTTAGACTTCAGATCTGTGGACCTCCTGCTTCCCGATCGAAGCTATTTTTGCTGTGTTCTATAGCACCTTCCTGTCACATGCTCTGAGATGTTAATTACTGAGCCCCACACATACACCAGTGTGCCAGGCAGCTGCTGAAACACACCACCCATTTAACGTCAGCATCACCCTCAATTACACAGAAGAACTGCACAGCACACGCTTCGCTTGGCAGATGAGTTTGTTAATTCACTTAGAGTGGAAAGAATTATGGAGTTATGAAATGAATCTGCTCTCCAACCCCCCTCAGTTCTGCAGATGATGATTATAAAGTTTTGCCACTGTGATAAAACCTGCAGTATGTGACAAGTTTCTGAAGCTCTCACAAGGAAACATCTTATACAAATACAACACCTACTATACAAATATACCTCTTAAAGGGACAGTTCACTCAAAAATTTATATTCTGTCATTATTTACTCACTCTCATGCTGTTCCAAACTTGTATTCTGTGTTTTTTGTGTGTGTGTGTGTAATTTTGTGTTCAGTGGAGGAAATAACAGTGTAACAACATGAAGGACTGAATTCCAATTTTATGTGAACTATTTCATGTCGTGATGAAATGGAAGTAGAGACAGGATTTCTTCCGTATTGGATTTTTTCTATTTTGCGATGTACATCTGAGTTAAACAGATTATCAAAAAAATAAAAATGTAGGGTGAGGTCTTGGTTCTATGCAACAGTAGTTTATTGGCAGATCTGAATGTGAACTTGTAGTCGATTATCAGAAAGGGGCAGAATACACCACCAGTCTTTTTCACTGGAAGATCCGGTTCTGACATTGTGATTAAAAATTATGAGGTCAAATTAAAGAAAAAATGAAGCATACATGGATGAATCATTCACAATAACATTTGTAACTTGCATTTACAAAATAGATACAGTGAATATTAATTCCATGCAGACTTTAGGACTACTGCAAAATTCTGCAGTCCCGTTCTTTGCTGTCTATCTCACCACTATTTTCCTGTCTATCTCTAATCAATGGTCAGAAGATAAGATGAAAATATGCATCTGATCCTCTACAGACTTTCCACATCAAATCTGTTGAGTGAACAGGGGAAATTCCACAGGGAAAATGAAATTTAGCTTTGGTACAACAGATCTGCTCCTGCCCTTTTCCTGAGTCCCCTCCCTGTCAAAGTACATTATCTCCACTCAAGGCTATTTCTAACACACAGGATGTTTGCTTGTCTACAGGCTCACCCCGCCTCTTCAGAGTCCTCTTTCAGTCGTCCTGAGATATCCACATAAAATGCGGACAAACACTTTCAATGCCCCCTTTGTACATCTTGTACCCACAGAGTTTGAGTGTTCAAAACTTGCCGATCTTCCTGAAGGTCATTCTTCAGTTTTCATCTGTCGAAAAAGTAATGCGTTTCGTATTTCAAATAAATGCTGTTCTTTTGAACTTAAAGGGTTAGTTCATCCTAAAATGAAAATTAAGTCATCATTTAATCACCCTGTTGTTGTTCTAATGCCGTATGCCCTTCTTTCTTTTTTAGATCACAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172441 True 3020 lncRNA 0.35 2 865287 1344236

Neighbor

gene id symbol gene type direction distance location
CI01000029_00754131_00762051 HECA coding upstream 102938 753841 ~ 762349 (+)
CI01000029_00751587_00751771 ABRACL, CF115 coding upstream 113292 751587 ~ 752779 (+)
CI01000029_00718512_00738422 NCOA1, FAM184A coding upstream 126695 717495 ~ 738592 (+)
CI01000029_00711035_00714680 NA coding upstream 150339 710952 ~ 714948 (+)
CI01000029_00645958_00649352 EPHX1 coding upstream 215363 645958 ~ 649924 (+)
CI01000029_01396098_01435688 GALNT14 coding downstream 51207 1395443 ~ 1436078 (+)
CI01000029_01475527_01497973 EHD3 coding downstream 130694 1474930 ~ 1498068 (+)
CI01000029_01526863_01527414 NA coding downstream 182518 1526754 ~ 1527899 (+)
CI01000029_01533005_01534392 NA coding downstream 188239 1532475 ~ 1534556 (+)
CI01000029_01542500_01557216 C1ORF95, STUM coding downstream 197914 1542150 ~ 1558713 (+)
G151758 NA non-coding upstream 195524 669485 ~ 669763 (+)
CI01000029_00643229_00643768 SRP09, SRP9 non-coding upstream 221002 642563 ~ 644285 (+)
G151672 NA non-coding upstream 305650 550821 ~ 559637 (+)
G151677 NA non-coding upstream 329701 535067 ~ 535586 (+)
G151977 NA non-coding downstream 18715 1362951 ~ 1363894 (+)
G151982 NA non-coding downstream 100676 1444912 ~ 1445191 (+)
G151991 NA non-coding downstream 111971 1456207 ~ 1456417 (+)
G151996 NA non-coding downstream 117768 1462004 ~ 1462313 (+)
G151997 NA non-coding downstream 120975 1465211 ~ 1465488 (+)
G151495 NA other upstream 493365 366541 ~ 371922 (+)
G151415 NA other upstream 640042 170521 ~ 225245 (+)
G152451 NA other downstream 1417358 2761594 ~ 2762939 (+)
G153475 NA other downstream 2200889 3545125 ~ 3562004 (+)
G153790 NA other downstream 3389353 4733589 ~ 4740107 (+)
G154587 NA other downstream 3926784 5271020 ~ 5271535 (+)

Expression


Co-expression Network