CI01000029_01396098_01435688 (GALNT14)


Basic Information

Item Value
gene id CI01000029_01396098_01435688
gene name GALNT14
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1395443 ~ 1436078 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_01396098_01435688.mRNA
TTATATAACGTGATATTTCATATAAATTTAATTCAGATGATTAAATGACACTTAAAACCAAAACAAACTGTGTTAGTACTTTTCATGTATAATCAAACAGACCTTTCCTGTCTAATTGGGAATGAATTTCCATTAATGTTCTTGCCATTCATGATTCCAAGATAAGGATTTAAAACAACAACAAACAAACATTTTTACAGAGATTTTATAGAGATTTTTCCATTACTAAAAATCGCGAATAATAAAATCCTGTGATATTTTCAGGCTTCCCATGGCAGTGGGACCCCTGCTTATTGTAAGCCTATTTCACAAATAACGGAGAGAAATTCAGAGTCAATATTAGAAGCTCACCAGGAACAGCCAGGTCCGTGAAAGCGCAGTTCCGCGGTAGGTGGTGCTAAACTCATTCACATTTTGTCGGTACCTCGGTGGGTACACAGGATGATTTTAATCGCCCTGGACAGCGTCCAGCGTCACTCAAAATCTCAGCAAGTCAGCGCGCTGCGCACGAGAGCAACAACCTCATTCCTGGATATTAGGCACTACGGGCAAGTGCGCGAGCGCTGCGCGCGGACACAATTCGCCTGTCGTTCACTGAGAGAGGAGCGCGCGAATGGTTTTCAAACTGAAATGAATCGTTAACGGACGTTTGAAAATGAAGAGGCTTTCTCGAAAGCTGACTTTAGCTCTCGCAGCGCTGTTTTGGATAGCCGCTTTACTCTATTTCATATTGCTGAATAGCCGGAAAATACTACCTGACCAAAGAAACGAGCAACCGAAAGTAAAAGAGATTTCAGATGCTGAGTGGGATGACCTGCTGGAAGAGTTTGAAGAGAAAAGCTACCTCAATGCTCACAAATGGAAGCAGGGCCAAGACCCCTACAGTCTGTATGCCTTCAATCAAAGAGAGAGTGAGAGAATCCCCAGCAACAGAGCACTTAGAGACACCCGACATTACAGGTGTACAACGCTGCACTATGACCCCGACCTGCCATCCACCACCATAGTGATCACGTTCCACAATGAGGCACGATCTACCCTACTGCGCACAGTTAGGAGAGGTTATTACTACAGGGGAGTCCTAAGAGGTGGAAGAGACTTACTTGAGCATTTCCTGGTTTCCTCAGACTCTGCTTGCGGATACTTATCAGGCAAAGGAGAGAGAGTGAGAGAGATTGTGTTGAATCGGACTCCTGTGCATCTGATTCATGAGATCATACTGGTGGACGACTTCAGCGAGGATTCCAACTCTGTACAAGAGAAAATTGTTAAAAGGTTTAAGGCATTTAAACCCCATTGTCGTCCCAGAGCTACAAACAGGGTGTGCGGTTCTGCTATGTTAACTCTATTAGCTCTAGGACTGATCCGATCCAGGGTTCGAGGAGCGGATGCTGCAGGAGCCGGGATCCTGACGTTTTTGGATAGTCACTGTGAGGTCAACAAAGATTGGCTGCCTCCACTGCTGCAGAGGGTCAAAGAGGACCCGACCTGTGTCGCCAGTCCAGTGATTGACATCATTAATATGGACACGTTTGCCTATGTCGCCGCTTCCTCAGACTTGCGAGGAGCGCTCTCAGAGGCTGTTGTAATGAAGGCTGTTAATAGCTCAGATAAGCAGGCAGTCGGGCTGAGAGAGGCTCAGATCCCGTCTGCTCCTGCGTGTGCTGTGTACCGAACGCCCATCATTGCAGGAGGACTTTTTGTGATTGACAGATCCTGGTTCAATCGTTTGGGAAAATATGACACAGCCATGGACATCTGGGGAGGGGAGAACTTTGAGATTTCTTTCAGAGTATGGATGTGTGGAGGAAGCCTGGAAATCATTCCCTGTAGCAGGGTCGGCCACGTATTCCGCAAGAAACATCCCTACATCTTCCCAGAGGGCAATGCCAACACATACATTAAGAACACCAGAAGGACTGCTGAAGTTTGGATGGATGAGTTCAAACTGTTCTACTACTCAGCTCGACCAGCTGCTCGGGGGAAGTCCTATGGAGACATTCACAGCAGACAGGAGCTCCGCAAGAGTCTCAAGTGCAAATCCTTCAAGTGGTATCTGGACAATGTCTATCCAGAGCTCAAAGTTCCTGATGATTCTGATGCCAAGTCTGGTGTGATTCGGCAGAGACAGAACTGTCTAGAGTCTCGAATAGTTGAGGGACAGGATCTCCCAGTGCTCACACTCGCACCCTGCATCATCACCAAAGATGTACCAGCAGCCAACCAGGAGTGGATCTACACCCACGGACAGCAAATCCGACAGAAGCAGCACTGTCTGTCCGTCTCCACCACTTTCCCTGCCTCCCAGATCCTGCTCGTGCCGTGCAACATCAGCGACGGCAAGCAGCGTTGGCAGAAATCTGGCACTCACCTGGAGCACCTGGCGTCTCGTTTCTGTGTGGACAGCGAGATGGCTCTGGACGGCATCGAGAGCAGTAAAATGCTGAGCTCAGCTGGAGTCAAAGATGGATTGAGAGGCAGAGAGAGCGAGTGTGTACCTCCAGGAGGGGCTACATCTGTGTCCTGCTGTTCTGCTATGTCCACTCCCTTTGTCTCTTCCGCACACCCCAGATTTTCTATACCGGGAGGTTTCAAGATTTCTAGTGGCAAGGAGCCCTAAACAATCCCCTTGTGAGATCAATTTTTTATTAGGCTTACATTATAATATAATATAATGTTTAAGTATTTAAACTGATATACAGTATTATATCAGTTTAAATGCTTCAATTTGTTTTAAAATATTATAATATGAAAACAAACTGAAGCATTTAAACAGATCTGATAGCTAAATATTTTTAAGAAAAGTGAACATGTTAACTCTTTTATAGTTAACTAAACATCCCTGAAACCCACACCACCACCACCACACACAATAATCTATATAAACTGAGGTATATAACTGATGTATTTTGAGTTTGCACGCTACACCTGTGGTGGGTGTGTAACTGTAAATGTCTCAGAGTTTTGTTAACATTCTGTGCCCATCATCTGTTATTTTCGCCACTTTTCA

Function

symbol description
galnt14 Predicted to enable carbohydrate binding activity and hexosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human GALNT14 (polypeptide N-acetylgalactosaminyltransferase 14).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_01396098_01435688.mRNA True 3010 mRNA 0.46 18 1395443 1436078

Neighbor

gene id symbol gene type direction distance location
CI01000029_01318644_01336634 NA coding upstream 58522 1317774 ~ 1336921 (+)
CI01000029_01304740_01313262 FLVCR1 coding upstream 82178 1302326 ~ 1313265 (+)
CI01000029_01297680_01300190 TATDN3 coding upstream 95197 1297611 ~ 1300246 (+)
CI01000029_01284636_01285656 NA coding upstream 109485 1284636 ~ 1285958 (+)
CI01000029_01259557_01263294 PEX3 coding upstream 132149 1259256 ~ 1263294 (+)
CI01000029_01475527_01497973 EHD3 coding downstream 38852 1474930 ~ 1498068 (+)
CI01000029_01526863_01527414 NA coding downstream 90676 1526754 ~ 1527899 (+)
CI01000029_01533005_01534392 NA coding downstream 96397 1532475 ~ 1534556 (+)
CI01000029_01542500_01557216 C1ORF95, STUM coding downstream 106072 1542150 ~ 1558713 (+)
CI01000029_01616562_01644867 ADCK3, COQ8A coding downstream 180357 1616435 ~ 1644880 (+)
G151977 NA non-coding upstream 31549 1362951 ~ 1363894 (+)
G151810 NA non-coding upstream 51207 865287 ~ 1344236 (+)
G151904 NA non-coding upstream 387105 1004177 ~ 1004713 (+)
CI01000029_00751587_00751771 ABRACL, CF115 non-coding upstream 642664 751587 ~ 752779 (+)
G151758 NA non-coding upstream 725680 669485 ~ 669763 (+)
G151982 NA non-coding downstream 8834 1444912 ~ 1445191 (+)
G151991 NA non-coding downstream 20129 1456207 ~ 1456417 (+)
G151996 NA non-coding downstream 25926 1462004 ~ 1462313 (+)
G151997 NA non-coding downstream 29133 1465211 ~ 1465488 (+)
G152002 NA non-coding downstream 36951 1473029 ~ 1473465 (+)
G151495 NA other upstream 1023521 366541 ~ 371922 (+)
G151415 NA other upstream 1170198 170521 ~ 225245 (+)
G152451 NA other downstream 1325516 2761594 ~ 2762939 (+)
G153475 NA other downstream 2109047 3545125 ~ 3562004 (+)
G153790 NA other downstream 3297511 4733589 ~ 4740107 (+)
G154587 NA other downstream 3834942 5271020 ~ 5271535 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location