CI01000029_01318644_01336634


Basic Information

Item Value
gene id CI01000029_01318644_01336634
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1317774 ~ 1336921 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_01318644_01336634.mRNA
ACATAAATGAAAAGTGAAATAATTAACTTGACACAAAAATAACTACAGTTAAAGGCTTTATGCCTTTTAATATAAACTTTTGAAAATGTTATAATATATTTTTTAATGATTTTACATACACTCTCACTTTAAATCATAGACTGTAAAAAATGCACATTTTAAAAGCTCACAAAAAACCCTGCTGGATACACAACGAAGCTTCACGCCTATTTCCGCCATTTTAGCCAATCACAGACTGATCTATTTCCCTTATATGGAATTGAACCCGCCTCGCTTTGTTGCTTCATCCAATGAAAATTCGCCAGAACTTGATTGGCTGTTGTTTATGGCGATACAATAACAGTATCAAAAAACGCTAGAGTGAGTGACCATTTGTTGAGACCGTCAGTGAAAACGGTTACACGCCTACACAGAAAAACAAATCATTCATTAATACTTTACAGTCAGTTATTAAATTAGTCTACCGTGGATTATCAGCCCGTGATCCCTCCGCAGGAGTCGATAACCTCCTCAGTGTTTTTGAGCGAAAGGATGAAGTAGTTTCTGTGGCACCCTGAGCTCCGGAGCTGATCGCCAACTAACGTTACAGTATGCGGTTTGCTGGGAATATATGACAATTTCTGATTTTATTCTATCCTTCAAGGACATTCACCCATAGTTTGATACAGAAATGGTATCGCTGACCATTTTTTCTGTCTCTGGATCTTTTTCAAACCACCTGAATTTTCATACTTGAGCAGGACTGTGTGGTTTTGGCACATTAATATGCAAGCTCGAGGTGCAACATGTCTTTGTGCATGAATGCTAGGCAATCATAACTGATCTGGGGAAACAACAAGGGGAAACTCCCCTTCGGAAGACTTCTGAACAATGACCGGACCAAGCACCACCAGCAGCGGCGGCGGCGGCTCAACGGCCAAGATCAGCAGACACGGTCGGTCCAAAAGCACCAGTACCTACTGTCACACTACGGGTCCCGCTGCTGAAACCTCCTCGTCCACTGCCGCAAACAACACCGGTAGGTCGTCCGGTGAGGAAGACGAGAAAGACGGCGGGGTCCCGTTTTTCGTGAACAGGACGGGCTTTCCCATAGACGGTGTCACCTGGGAGAGAATGTGGGCGCACGTCACCAAAGTTCATCCTGATGGACAGGAGATGGTGGATAGAATACGAAATGCAACACACCTCCCAAAATTGGTTTGTACCCTAGTTCTTAAATTTCATCATGGATACCCTAAAACAAACACCACTCAGTTTACTGATGTCATTAATGGCATTAAGCGGTTCCCCATCAGCTTTAAGACCCAGTTCTCCGGCCACCACTTCCATCACGTCGTGCTGGGCGTTTACTGTAACGGCCGCTACGGCACCCTGGGTATGAGTCGGCGTGCTGACCTTATGGACAGATCTCTGAGCTTTCGTACTCTCAGCGAGTTGGTGTTCGACTTTGAGGACTCATACCGCCGCTACCAGCACACCATGAAGAAGATCAAAATCGGCCTGTACGTGCCCCACAATCCGCATGTTTTCCAGCCTATTGAGTGGAACTATCTGGTGATCAATGCCTGCAAGCAGGGCCGTGAAGACATGCGCAAAGAGCTGGAGAAGCACGGCCGTGACATGAGGATGAAGTCACTAATGAGAAAACACAGTGAGAGCGACTCAGCGTTTGCTCCCTGTGGTGTGAAAAAGTTCAAGCCATACCCGTTTAATAAAGTGATTGTAGATTTGTCGTTTTCTAGCACCGGACCCCTGTCGAGCTGATGATAGGCAGTATTCCTCATCTGTTCCTTTCTCAGCTTGACTTTTACCACCTTGAAGATTTTAAGCCCATTTTCATTCTAATTGCCTTGAAATCCTAATTTCATGAACAAACTGAAGATAAAAATGATCTCTCCTATATAATTTTACTTTATAATCTCACTTGCATAATATATTAACTTATTCACAAATATAAAAATAATGAATATAAAATATGTGAAATTAATGAAAGTTTTAAAACAACTGGGTTTTATTGCAGATCCTCAAGTCGTCCAGTGCTCAGTCTCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_01318644_01336634.mRNA True 2051 mRNA 0.43 4 1317774 1336921

Neighbor

gene id symbol gene type direction distance location
CI01000029_01304740_01313262 FLVCR1 coding upstream 4509 1302326 ~ 1313265 (+)
CI01000029_01297680_01300190 TATDN3 coding upstream 17528 1297611 ~ 1300246 (+)
CI01000029_01284636_01285656 NA coding upstream 31816 1284636 ~ 1285958 (+)
CI01000029_01259557_01263294 PEX3 coding upstream 54480 1259256 ~ 1263294 (+)
CI01000029_01206589_01231131 AIG1 coding upstream 86616 1204463 ~ 1231158 (+)
CI01000029_01396098_01435688 GALNT14 coding downstream 58522 1395443 ~ 1436078 (+)
CI01000029_01475527_01497973 EHD3 coding downstream 138009 1474930 ~ 1498068 (+)
CI01000029_01526863_01527414 NA coding downstream 189833 1526754 ~ 1527899 (+)
CI01000029_01533005_01534392 NA coding downstream 195554 1532475 ~ 1534556 (+)
CI01000029_01542500_01557216 C1ORF95, STUM coding downstream 205229 1542150 ~ 1558713 (+)
G151904 NA non-coding upstream 309436 1004177 ~ 1004713 (+)
CI01000029_00751587_00751771 ABRACL, CF115 non-coding upstream 564995 751587 ~ 752779 (+)
G151758 NA non-coding upstream 648011 669485 ~ 669763 (+)
CI01000029_00643229_00643768 SRP09, SRP9 non-coding upstream 673489 642563 ~ 644285 (+)
G151672 NA non-coding upstream 758137 550821 ~ 559637 (+)
G151977 NA non-coding downstream 26030 1362951 ~ 1363894 (+)
G151982 NA non-coding downstream 107991 1444912 ~ 1445191 (+)
G151991 NA non-coding downstream 119286 1456207 ~ 1456417 (+)
G151996 NA non-coding downstream 125083 1462004 ~ 1462313 (+)
G151997 NA non-coding downstream 128290 1465211 ~ 1465488 (+)
G151495 NA other upstream 945852 366541 ~ 371922 (+)
G151415 NA other upstream 1092529 170521 ~ 225245 (+)
G152451 NA other downstream 1424673 2761594 ~ 2762939 (+)
G153475 NA other downstream 2208204 3545125 ~ 3562004 (+)
G153790 NA other downstream 3396668 4733589 ~ 4740107 (+)
G154587 NA other downstream 3934099 5271020 ~ 5271535 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location