CI01000029_04076167_04079831


Basic Information

Item Value
gene id CI01000029_04076167_04079831
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 4075796 ~ 4079964 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_04076167_04079831.mRNA
GTAGAAAGAGAGACGGCTGAGAGACATTACAAATGAGAAAAGGTCCATAGCAGTTTTGAGGTAGTGTCGAGCCCTAATCCAATCCACCATATTTTTAACCTAAGAGCAGGCATCCACTTACAGTTATTTGACCTGTACAAAAACATGCTTGATATTGCAAACTGGTGTTTGCTATATTATTTTAATACTTATTATCGTAATTATAAACACACTGGTTTGTAGTGCAAATAGTAATTCTTCTAATTATTTATGGAAGTCTCATACATTCACAGAAAACAGCTTATTTCCGTGTTGCAAAATAAGGTGGATAAGCAATAATGACGCACAACTAATAAACTACAAAGACCAAATAAAAGTCCAAGCTTTATATGATGTCTTTGTCCTCTCAGGAGCTGTATTCTCAGTGCTATGATGAGGTGGGGGTGATGTTTGCCTCCATCGCTGGCTTTAATGACTACTATGAGCAGAAGGAGATCAAACACGAGGGAGTTGAGTGTCTCAGACTGCTCAATGAGATCATTGCAGACTTTGATGAGGTAAACCAAGCTAACAAAATGGTAATGGCTTGTGGAATAGACCTCAGTCAAAGAATTGCCCATGGCCCTGTTGTTGCTGGGGTCATCGGTGCCACCAAACCCCAGTATGATATCTGGGGCATGACAGTGAATTTGGCAAGCCGGATGGACAGTACTGGAGTCAGTGGAAGGATTCAGGTCCCTGAGGCCACACGTAATATTCTAGCAGACTGGGGCTTCGTGCTAGAGTTACGTGGTGAGATATACATCAAGGGCGTCAGTGAGAGAAAGGGACGTGTCCGAACGTACTTCATCAGCACCAAAAGGCGTCAGATGGCAAGCAGCGGTATTGCAGACAGAGGAAAGAATGGACGCAGTGGGAGGACCACCCTGGCCGCTGTGGTCTTTGGCCTTGTACAGGCTATTCACAGAGAGAAACAGAGAGTTATATCTGCAGAAATGGCTGATTCAAAGGACGACAAGCTCTACAAAGCCGAATATGCGAAAAGTGGACGCGCCTCTTGCAAGAAATGCAAAGAAAACATTGCTAAGGACTCGCTGAGAATGGCCATTATGGTGCAGGTATGCTCTTGGATGCATAGTGTTGTTAATGTAATTGCATTACACGTTTGTATGAATATTTCGCAGGCCCAAGAGGAGTTTAAATGAGGAGTATTCATGGAATGCAAGAGATAAACAGTGATTTCAAATGTAATGAATTGATAATACAGTGAAGCCCAAAAGAAACAATGAGTTTAAAATGACTGAATTTCACATCCCTCGTAGCTGGATTCATGACTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_04076167_04079831.mRNA True 1317 mRNA 0.42 5 4075796 4079964

Neighbor

gene id symbol gene type direction distance location
CI01000029_04060211_04069639 NA coding upstream 5336 4058738 ~ 4070460 (+)
CI01000029_04007545_04011744 NA coding upstream 63788 4007545 ~ 4012008 (+)
CI01000029_03976118_03980629 SNX9, SNX9B coding upstream 94996 3976118 ~ 3980800 (+)
CI01000029_03855238_03922931 MLLT4, AFDN coding upstream 152676 3855238 ~ 3923120 (+)
CI01000029_03830894_03838298 NA coding upstream 237471 3829607 ~ 3838325 (+)
CI01000029_04099307_04107542 LIN9 coding downstream 19343 4099307 ~ 4107547 (+)
CI01000029_04143243_04143794 NA coding downstream 63279 4143243 ~ 4144051 (+)
CI01000029_04213048_04215977 NA coding downstream 133084 4213048 ~ 4216310 (+)
CI01000029_04223968_04232159 CLIC4, CLIC5, CLIC5B coding downstream 143580 4223544 ~ 4232309 (+)
CI01000029_04253844_04257502 NA coding downstream 173762 4253726 ~ 4257678 (+)
G153589 NA non-coding upstream 2162 4073193 ~ 4073634 (+)
G153568 NA non-coding upstream 62798 4012687 ~ 4012998 (+)
G153562 NA non-coding upstream 72667 4002925 ~ 4003129 (+)
G153561 NA non-coding upstream 73235 4002324 ~ 4002561 (+)
G153555 NA non-coding upstream 81420 3992553 ~ 3994376 (+)
G153598 NA non-coding downstream 38567 4118531 ~ 4118925 (+)
G153600 NA non-coding downstream 39921 4119885 ~ 4120221 (+)
G153602 NA non-coding downstream 44795 4124759 ~ 4135507 (+)
G153605 NA non-coding downstream 61940 4141904 ~ 4142121 (+)
G153645 NA non-coding downstream 179354 4259318 ~ 4259607 (+)
G153475 NA other upstream 513792 3545125 ~ 3562004 (+)
G152451 NA other upstream 1312857 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 2547897 1526754 ~ 1527899 (+)
G151495 NA other upstream 3703874 366541 ~ 371922 (+)
G151415 NA other upstream 3850551 170521 ~ 225245 (+)
G153790 NA other downstream 653625 4733589 ~ 4740107 (+)
G154587 NA other downstream 1191056 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 1377277 5461497 ~ 5470346 (+)
G155079 NA other downstream 2202721 6282685 ~ 6288398 (+)
G155083 NA other downstream 2351571 6431535 ~ 6490294 (+)

Expression


Co-expression Network