CI01000029_05496375_05508658 (WDR26, WDR26B, WDR26.S)


Basic Information

Item Value
gene id CI01000029_05496375_05508658
gene name WDR26, WDR26B, WDR26.S
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 5496375 ~ 5508746 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_05496375_05508658.mRNA
CGCGCCTGGACGCCATTAGATCTGCAGCTGTTTGGAGAGAAACAACAACAAAACGAACGACCCTCGCAGAAAACGCGTTCTGGACCGCGGGAGCCCGACGCCTCTTTCCCCTCCCCCGGGCTTCACCGGCTTCTAACCACGGCCGCTCTCGGTGAGGAAACTCTGGCCTCCGCTTCCTCCTCCTCCGACTCGGACACCGGCGGAGCGTCGCCGCCCCCGCGGAAGAAGCACCGAGCCTCGGCGGCGGAGGGAGTAGGAGAGCCCGGGGCTTCAGCGGGCCTTCCATTAGCGACCCACCTCAGCCGAACCGGCACCAATATGCAGTCTAACGGGACCGGACAGGAGCAGAACCACCCAGCCAGCACGCAAAATGGAGATGCCAACGGCCTCCAGAGCAACGCGGGCTCGGCTTCGGGGGCCTCCGGGACGGGTTCGGGTTCCTTGAAGAAGAAGAAGCGTCTGTCTCAGGCGGAGGAGGATGTAATCCGCCTCATCGGACAGCATCTACACGGGTTAGGGCTGAATCAGACGGTGGATTTGTTGATGCAGGAATCTGGCTGTAGATTGGAGCATCCGTCAGCCACAAAGTTCCGGAACCACGTCATGGAAGGGGAATGGGACAAGGCTGAAAATGACCTCAACGAGCTAAAAGCATTGATGCATTCACCCAACGCTATTGTGCAGAAGTATCTGGAGTATTTGGAGGATGGAAAAGTTCTGGAAGCTCTGCAGGTGTTGAGAGGAGAGTTGACTCCACTCAAATACAACACGGATCGAATCCACGTGCTCAGCGGGTATCTGATGTGCAGCCATGCTGAGGATCTGAAGGCAAAGGCTGAATGGGAGGGAAAAGGCGCTGGATCACGATGTAGATTACTGGACAAGCTCCAGACGTACCTGCCCCCCTCTGTAATGCTGCCTCCTCGGCGGCTGCAGACGCTGCTCAGACAGGCCGTGGAGATGCAGAGAGATCGCTGCCTTTATCACAACACCAAACTGGACTCCAGTCTGGACTCTGTGTCCTTACTGCTGGATCACGTCTGCACCAGGAAACAGTTTCCCTGTTACACACAGCAGATCCTCACAGAGCACTGCAATGAAGTCTGGTTCTGCAAGTTCTCCAACGACGGCACTAAACTCGCCACCGGCTCGAAGGACACAACTGTCATCATCTGGCAGGTGGAGCCGGACTCACATCAGTTGAAGCTCTTACGAACTCTGGAGGGTCACGCGTACGGTGTGTCGTATCTTGCCTGGAGTCCCGATGATGTTTACCTGATCGCCTGTGGTCCAGACGACTGCTCTGAGCTCTGGCTGTGGAACGTTCAGACAGGAGAACTGCGAACAAAGATGAGTCAGTCTCATGAGGACAGCCTGACCAGTGTCGCATGGAACCCTGACGCCAAACGCTTCGTTACAGGAGGACAGAGAGGGCAGTTTTACCAATGTGATCTAGACGGAAACCTATTGGAGTCGTGGGAAGGCGTGCGTGTGCAGTGCCTCTGGTGTATGAACGACGGCCGGACTGTTCTCGCTTCTGATACGCACCAGCGAATCCGTGGATACAGTTTCGAGGACCTAACAGACAGAAACATAGTTCAGGAGGATCATCCTATAATGTCTTTCACTGTTTCTAAGAATGGAAGATTAGCTTTGTTAAATGTAGCAACTCAGGGCGTTCATCTCTGGGACCTACAGGACCGTGTGTTGGTCAGGAAGTATCAGGGTGTGACACAGGGTTTCTACACCATTCACTCCTGCTTCGGTGGACACAACGAGGATTTCATCGCTAGCGGTAGTGAAGATCATAAGGTATATATTTGGCACAAGCGCAGCGAGCTGCCGATTGTGGAGTTGACGGGACACACGCGCACAGTGAACTGTGTCAGCTGGAACCCGTGTATTCCCAGTCTTATGGCCAGCGCTTCTGACGACGGCACAGTCCGTATCTGGGGACCCGCACCCTTCCTGGACGCACAAGAGCTGGACGGCCTCAATGGTACAGATATACTATCCAGTCGCAGATACAGGAAGTGTAATTTCACTGCTAGTTAGTGCTTCACTGATTCATTGGGTGACCTTTAGGTTTCAGCCTAGTTGATGCACGAGCAAAAAATACTATCACTCTAGATAATACTTGACA

Function

symbol description
wdr26b Predicted to be located in mitochondrion and nucleus. Orthologous to human WDR26 (WD repeat domain 26).
wdr26 Located in cytosol; mitochondrion; and nucleoplasm. Part of ubiquitin ligase complex.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_05496375_05508658.mRNA True 2143 mRNA 0.54 13 5496375 5508746

Neighbor

gene id symbol gene type direction distance location
CI01000029_05474130_05494930 ADCY3 coding upstream 1156 5473763 ~ 5495219 (+)
CI01000029_05461497_05468985 BATF coding upstream 27251 5461497 ~ 5470346 (+)
CI01000029_05444811_05447063 NA coding upstream 48711 5443358 ~ 5447664 (+)
CI01000029_05433797_05436469 NA coding upstream 59881 5433645 ~ 5436494 (+)
CI01000029_05402102_05409884 ZC3H14 coding upstream 86378 5402102 ~ 5409997 (+)
CI01000029_05512755_05521332 FEZ2 coding downstream 4009 5512755 ~ 5521332 (+)
CI01000029_05521742_05525648 FEZ2 coding downstream 12996 5521742 ~ 5525932 (+)
CI01000029_05577218_05577697 NA coding downstream 68472 5577218 ~ 5578537 (+)
CI01000029_05578983_05588654 NA coding downstream 69886 5578632 ~ 5589707 (+)
CI01000029_05591971_05597708 NA coding downstream 83225 5591971 ~ 5597842 (+)
G154564 NA non-coding upstream 42240 5453310 ~ 5454135 (+)
G154536 NA non-coding upstream 45084 5448056 ~ 5451291 (+)
G154620 NA non-coding upstream 68503 5427662 ~ 5427872 (+)
G154511 NA non-coding upstream 72155 5420112 ~ 5424220 (+)
G154560 NA non-coding upstream 137772 5358155 ~ 5358603 (+)
G154572 NA non-coding downstream 62356 5571102 ~ 5571475 (+)
G154674 NA non-coding downstream 202363 5711109 ~ 5711373 (+)
G154675 NA non-coding downstream 211542 5720288 ~ 5721868 (+)
CI01000029_05772821_05785145 NA non-coding downstream 276616 5772821 ~ 5785381 (+)
G154900 NA non-coding downstream 348963 5857709 ~ 5858056 (+)
G154587 NA other upstream 224840 5271020 ~ 5271535 (+)
G153790 NA other upstream 756268 4733589 ~ 4740107 (+)
G153475 NA other upstream 1934371 3545125 ~ 3562004 (+)
G152451 NA other upstream 2733436 2761594 ~ 2762939 (+)
G155079 NA other downstream 773939 6282685 ~ 6288398 (+)
G155083 NA other downstream 922789 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 1397442 6905834 ~ 6908633 (+)
G155522 NA other downstream 2126087 7634833 ~ 7637834 (+)
G155627 NA other downstream 2422734 7931480 ~ 7932177 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017653 wdr26b coding NC_007131.7 CM002904.2 46699021 ~ 46734051 (+)