CI01000029_05577218_05577697


Basic Information

Item Value
gene id CI01000029_05577218_05577697
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 5577218 ~ 5578537 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_05577218_05577697.mRNA
ACTCAGACCATGAATTACGTGGGTCAGTTGGCAGGGCAGGTGTTCGTGCAGGTGAAGGAACTCTACAGAGGTCTGAATCCCGCCACGCTGTCCGGCTGCATTGATGTTATCGTTGTCCGACAGCCGGATGGAGCTCTAATCTGCTCTCCATTTCACGTACGCTTTGGAAAGATGGGTGTCCTGAGATCACGAGAGAAAGTGGTGGACATTGAGATCAATGGGGAACCTGTGAATTTGCACATGAAGTTAGGCGAGAACGGAGAAGCATTTTTTGTCAAGGAGACAGAAGACAATCAGGTGCAGAACAACAGAGAAACATGCAACCACTCACCTTTTGCTCGACACGACAGTCACCAATATTCATGCTTGTTTCCTTTCTAAAGCTGTGGTCACACTAGACTTTTTGCTCATTCACTTCTATTCATAGTGAGAGCTGGAGACCAGAAAATGCAAGCTCAAGTTTGGTGACCTCTGAATTCACATTGAGCAAAGATATTTGATCAGAAGATAGAAGTTGCAAAGCTTTCAGTGCTATAGGCTCTGAAGTCATTTTGCATGCTCAAAGTCTAATGTGACCATGTTGTGATCTTAAAGGGGACCTATAATTCCCCTTTTATAAGATGTAATATAAGTCTCTGGTGTCCCCAAAATGTGTCTGAAGTTTCAGCTCAAAATACCCCACAGATCATTTATTATAGCTTGTCAAATTTGCCCCTATTTGGGTGTGAGCAAAAACACGCTGTTTTTGTGTGTGTCCCTTTAAATGCAAATAAGCTGCTGCTCCCCAGCCCCCTTTCCAGAAGAGGGCGGAGCTTTAACAGCTCATGCTTCGGTTGCTCAACAACAACAAAGCTGAAGAATCTTACACAGCCAAAATGAGGATTGTCAGTAACAGTGTTCAGCCTTACATTGTTCAAACCGGAGTCGGACACTGATGGAGAGACTCAGGAAGAAGTTAATTTAATTTTTGGATGAACTAACCCTTTAATCCAGCTTTCTAGAACTGAGCTGCATTCTGGACCAGATCAGAGCAGTGATTCTAGAACAGAACCCTACACTTTTAGAATTTAGAATACTTTAAGAGTAAGATTCTAAAAAGTAACAGTGCAGTATTCTAGAACAGTACAATGATTTTAGAACAAAGCTTTATTGTAGAATAGAAGAGCATTTTGGAACAATAGTATTGTGGAACAGATTAGTGTTCTGAATGGGATGAAAGAA

Function

NR:

description
Phosphatidate phosphatase LPIN1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_05577218_05577697.mRNA True 1221 mRNA 0.42 2 5577218 5578537

Neighbor

gene id symbol gene type direction distance location
CI01000029_05521742_05525648 FEZ2 coding upstream 51286 5521742 ~ 5525932 (+)
CI01000029_05512755_05521332 FEZ2 coding upstream 55886 5512755 ~ 5521332 (+)
CI01000029_05496375_05508658 WDR26, WDR26B, WDR26.S coding upstream 68472 5496375 ~ 5508746 (+)
CI01000029_05474130_05494930 ADCY3 coding upstream 81999 5473763 ~ 5495219 (+)
CI01000029_05461497_05468985 BATF coding upstream 108094 5461497 ~ 5470346 (+)
CI01000029_05578983_05588654 NA coding downstream 95 5578632 ~ 5589707 (+)
CI01000029_05591971_05597708 NA coding downstream 13434 5591971 ~ 5597842 (+)
CI01000029_05695252_05699826 NA coding downstream 114628 5693165 ~ 5699878 (+)
CI01000029_05772821_05785145 NA coding downstream 194284 5772821 ~ 5785381 (+)
CI01000029_06015438_06024591 HADHA, HADHAA coding downstream 436901 6015438 ~ 6025083 (+)
G154572 NA non-coding upstream 5743 5571102 ~ 5571475 (+)
G154564 NA non-coding upstream 123083 5453310 ~ 5454135 (+)
G154536 NA non-coding upstream 125927 5448056 ~ 5451291 (+)
G154620 NA non-coding upstream 149346 5427662 ~ 5427872 (+)
G154511 NA non-coding upstream 152998 5420112 ~ 5424220 (+)
G154674 NA non-coding downstream 132572 5711109 ~ 5711373 (+)
G154675 NA non-coding downstream 141751 5720288 ~ 5721868 (+)
G154900 NA non-coding downstream 279172 5857709 ~ 5858056 (+)
G154905 NA non-coding downstream 281281 5859818 ~ 5861073 (+)
G154587 NA other upstream 305683 5271020 ~ 5271535 (+)
G153790 NA other upstream 837111 4733589 ~ 4740107 (+)
G153475 NA other upstream 2015214 3545125 ~ 3562004 (+)
G152451 NA other upstream 2814279 2761594 ~ 2762939 (+)
G155079 NA other downstream 704148 6282685 ~ 6288398 (+)
G155083 NA other downstream 852998 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 1327651 6905834 ~ 6908633 (+)
G155522 NA other downstream 2056296 7634833 ~ 7637834 (+)
G155627 NA other downstream 2352943 7931480 ~ 7932177 (+)

Expression


Co-expression Network