CI01000029_08100383_08125091


Basic Information

Item Value
gene id CI01000029_08100383_08125091
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8099888 ~ 8125091 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08100383_08125091.mRNA
CGGCTGATCGAGACGTCGTCGTGGGGAGATGATTTGGCGGCCGTCGAGCAGCAGATAACCAATCACAGCGCGTTTCACAGCTCCATCCAGAGAAGTGTGGAGGTGGATCGAGCCCGAACGGAGCTGATGCGAGGCAAAGATCAAAACTCGGATGCAAACAAATCCTATCTCAACAAACTAGAGCAAGAATGGGACAGTCTTCAGAAAACCTCGTACCAGCGGAGCGTTCAGCTGCAGGACCTGCACAACATCATCCAGGAGATTTCCAGTCAGATCATGTGGGTGAACGACCGCGAGGAGGAGGAGCTGGTGTTCGACTGGGGCGATAAAAACATAGACACATACATCCCACAGAAACAAGAGAGCTTCTCGAAACTCATGAGCGAACTGGAGCAAAAGGAAATTGATCTGAACGTCCTGAAAGCGAAGGTGGACGGCCTGCTGAAGAACAACCACCCCGCATCTGATAAGATCCAGGCCTACATGGAGACGCTGCAGACGCAGTGGAGCTGGCTGCTACAGATCACCAAATGCATCAACGTCCATCTGAAGGAGAACGCACAATACAGCCAGTTCTTCAAGGAGACGACTGATATGAACAGAAAACTGCAGAAAGAACACGAGGGCATCCGCAAGAAGTTCTCCTGCGATAAATCCACCCTCCTGCCCAACCTGCTGGAGCTCTTACAGGGCCTGGAGAAAGAGCGCGAGCGTCTGATGGAGCAGAGAGAGATGGTGCAGCAGCTGGTGGTCAAATCCAAGAGCATTATCAGACTGAAACCCAGAAACCCAGAGGAGAAGATCACCGGTCAACATATACTCGTACAGGCGCTGTGTGACTTCAGACAGGACGAGAAGACGATCCGTAAGGACGATGAAGGGATTCTGAAGGACAACTCGGAGCGAACCACATGGTTGGTGACGGGACCTGGAGGGATGGACATGCAGGTGCCTTCGGTCTGTCTGTTAGTGCCGCCACCCAATCCACTGGCCATCAACCTGGCCAACAAGAATTCCCAGTATTATGAGGCCATTCTAAGCGTTTGGAATCAGCTGTACATCAACATCAAGAGTATGATCTCCTGGCAGTACTGTCTTCTGGACATCAACCGCATCAATTCACTCACCATCAACATGCTGGCCAAAATGGGTCCAGAAGAGTCCCGCAGCATCATCCAGAGTTTGGAGATGCACTTCCAGGAGTTCCAGAAGCACTGTCAGGGTTCAGATCTGTTCGGGGCAGAAGACCAGAAGCACATTGAGACCCAGTATGCAGGAGCCCAGCAGCACTATGGCAAACTGGTGGTGGCTCTGCCCACGTACGCCGCTCGAGGAGAGGGATCCGAGTTCGCTGCGGCGGTGAGCGTCAAACTGCTGAACGAGCTCTACGCTCTCAGATTCAAGCTGGACGAAGCCGAATCTTCCCTCGTCACCTTCCTGTACATCCCATTAGGAGAGGGCGGACTCGAAGAGTGCAGCCGCCACATCACCGGCACACAGGTGTTTCAGAAGGACATACAGACTGTGAAGGGAGAGTTTCTGAGCCTGCGTGACAGCGTTCAGGCTGAACTCAAAGACGCCACGGACACTGATAAAGCCAGATACCTGCGGGCTCAGCTGGACATCATCAACCAGAGACTAGTTAACCTGGATAATTACTGTACCGCACATCTCCAGAGGTTGAGTTTGGTGAAGTCCCTGCTGAAGGATATACTGAAAACTGAAGATGTGGTGAAGGTTTATGAAGCTCGACTGACAGAGAAAGAGACGGCGTCACTTGACCCCGAAGAGATCCAGAAATACCAGAAAGTGCTCCTGAGTATGCTCAGCGATTTGGAGCAGAAACAGGATGTGCTGAATTCACTGGTGGCTGATGTAAATAAAGTTCAGCAGTGTAACGAGCAGACGGATCAGAGCCGGTACAGGTGTATCATCAACCTCTCCCAGTACGCTGAGCATGTGAACCAGCTGTCAGACCGCTGGAAACGCATCCATTTACAGATTAACAGCAGGTTCAATGATCTGGAATCTTACCTGCCGCAGCTGCAGCGATACCTGCAGTCTAGTTCTCATCTCAGCGGTTGGATCGACGAGACTCAACGACAGATTGATGCTCAGCAGTCCGTCAAGACCGATGACGTCACAGTTTACTCCCAACTCCTCAACCAACAGAAGGCGTTAAACTCTGATATAAAGGCAAAGAGAGAGCTGTTGGAGACGGTGCAGAAAGACGGCAACACCTGCATAAATGCCATCAAGAATTATGAGCTTGAGTTAGCGTCTTACGGTGCTGGACTGGAAACTTTGCTTAACATCCCCATCAAGAGGACTGTGCTTCAGTCTCCATCTTCCTCCATTTCAGAAGAGGTCTCTTCTCTAAATGCACACTACTTAGAATTGCTCACCCGTTCAAGTGATTACTACAAACTTCTTATGGCTTCCCAGAAGAACATGGAAGAACTGAAGATGCGGAATACCAGGATTGAGATGCTCGAGGAGGAACTTCAGCAGTTGAGAGACGCCATTAAGAATCACACTGCCACGAATGCTTCTTTGCAGGAGGCTCTCCTTAAATACCAGCAGGAGCTGAACGACTCGCAGACACACCTGCTTTCTCTGGAAGAGGTGAAGAGGACTGAGACTTTGAAGTGCATGGCCACACAGGACAGCCTGGAGTCTTCTAAAAGCCAACTTCAAGAGCTTATGGACGAAGTACGTCGCCTCAAACAGCAGTTGGATGATATGGAGAGGAAGAAGAAGGTTGTGGAAGAGCGTTACATGTTTTTGCAGGAAGAACATGATGAAACCATGCGCAAGAAACTCAAAGAACTCGAGCAGGTCAGCTGGGCCAAGATGGAGCTGGAGAAGACGGTGTCTGAAAGGACCCGAGAACTGGAGCGTCTGCGCAAGGAGTTGGAAGACGAGGCTCGCCGCGTCAAGGAGGCGCAGACGGAGCTGGCAAAGGTAAGGCAGGAGCACAGCATACAGATACGAGAGGTGAAACAGACCTACGAGTCTCAAATCCTCGTTACTCAGACCAGCATGCAGAAGCTTTCGCAGCAGAAGGAAAGTGATTCTGCCTCCATGCAGCTGGAGATTGAAAAATTAGAGGGAGAATCTAGGGAGTTGAAGGAGCAGCTGCAAAGGCTTCGTCTCTCCCTCAGCCAGGAAGAGGTCCAGAGGAGACACTTGGAAGAGGAGGTACAGAGACTTAGTGCTGTAAATGCAGAGGAAGGCCGAAAGCGGCACGAGCTGGAAGCTCAAGTCCAGTTGATTCTTAGTCAGAAGCGTGAAGCAGACAACAAAACAAAGGAGGTACAAGAGAGCTCTAGTCGGACACTGCAGGAAAAGAGTAGTGAGATCAATAGTCTCACACGCTGTCTTGACGAGGAGCGACGTCTGAAAAGAACTTTAGAGACTGAGAAAAGGCGACTGGAGGGGGAGTTGGCCGACCTCAAAACTAAGAACGAAGCCTCTAATGTGGAATTGGTGCAGCTTCGCTCTTCCCACCGTGAGTTGAGCCTCATTCGGGTGGAGTTGGAGGCCCATGCCCTTGAAAAGGGCCGGTCTGAACAGACTATTACACGCCTACAAACCCGCATTCAAGAGCTCCAGGAGGAGCTGAAGCGCCTGGAAAGTGAGTTGGAGAAACAGCGGCAAGTGGCAGAAGAGGAGGCCAGCAAGCGCAGGAGATCAGAGTCGCAACTTGAAAAGAGTAGCCAGGCTATGCGAGAGTACACCACTACAATAACCACCCTGCGTAAGAGCCAGGAAGAGACCAGTCTTGAGGCAAAACACACGGACAATGAATGCAAGAAGCTGCAGGAGGCTCTAGATCGCACCTTGAAGGAGCACAAAGCTTCTTCTCAGAGCCTGGCTGCCTTGAAAGCTGAGATGAACACTCTGAAACTGCAGCTGACGCAGGAGCAGGGCCGCGTCAAAGACTCCAACCAGCGCTACGAGGCCCTTCATCGTAGCATGGAAGAGAAGACTTGTGCTTTGAACATAAGCACTGCTGAAACTGAACGTCTGCAGAGGCTCACCGAAACTCTCACCAAAGATCGCCTCCGTCTGGAGGAGGAGTTGCGCTGCGTGCGTCTAGAACACGAGGAGCTGCTCAAAGGCAAAAAACTCGGAGATCGGGATATGACTGAGCAAATCACAGCTTTGCAGAAACAGCTTGAGTCCAGTCAGCGTGCCGGTGCAGAGCATGACAGGCTTATGCGACAGCTCTCACGAGAGAGAGAAAAACTGCAACTGGAGATAGAAAATGTACAAAAACAAGCCAGAGAGACTTCCTCCGTGATCCAGACGTCACAATCTCAGTGCAGCAATCTGCAGCAAGAACGGGATGGCCTCCTCAGGAAAATGACAACGATGGAACAGGAATTGATGCGCTTGAAAAGGCAGGAAGACGAGTTAGCCCGTATCAAACTCTCACTGGAGTCAGAACTGCGTCTCAAATCACAGCTGCAGGAGGATAATGAGAGGATCAAGAAGGATTTTAACCAATGGAAGAGCAAATGTGCCACTCACGAGGAGCAACTTCGACAGCACATCTCAGAGCGCTCTGGCATGGAGAGCCAATTTAACTCTGTCAAGACCGAGATGGAGAGGCTTAGGACGCAACTGATGGAGGCTGAAGAACGCTACAGGCTGCTGTTGCAGAACTTGGAACGAGAAAGGGCACAGATGCAGGCACTTCGAGACTCACAGCAGAAGGAGTTGCTGAGACTGCAGCAGAAACCAGACGCTGCTGCTAAATACACTCAGACAGACCAAACCGACTCCTCCTCACTGGTCTTCGAAGGTGTCCGCAAGAAGGTCACGGCACAGCAGCTGCATGACTGTGGTGTGATTGACAAGTACACGTTTGATCAGTTGATGAAGGGCCAGCGGACTGTTCAGGATGTATCTGTTGACATCAGGCTCAATCTTAAAGGCACAGGAGCAATTGCGGGGCTGGCAGCAGGACCTAAAGGCAAGATGACCTTTACAGAGGCTAAGAATCAAAACTTGATTTCAGATGAAAGTGGAAACATGTTGCTGGAGGCTCAAGCTGCCACAGGGTACATCATAGATCCCCAAGCTAACATGAAGATGACTGTTGAGGAGGCTTGTCTGAATGGACTTGTGGATGAAGCTGACAAGCAGCAGCTGTTGACTGCAGAGGCTGCCTGTGTTGGGTTCAGGGATCCCAAAACTGCAAAACTCCTGTCAGCTAGTCAAGCCATGAAAAAGGGTATAATCAGCCGGGAAACAGCTCTGCGTCTCCTGCAAGCACAAGAGGCGGCGGGAGGCATCCTTGATCCCATCCTTAGTGTCTACCTCTCCAAAGATACTGCCATGGACCGTGACCTTGTTGATGAGGATCTTTATCAAGCTCTAAACGCCAGACCAGATTGCTACATTGATCCAGACACTGGTCTACGTGCTAGCTACGTTACCCTCAAGAAGCGATGCAAGGCTGACCTCAGCACTGGCTTGCTCCTGCTTCCGGCTCCAGTGAAACCCATGACTGTACAGGGACTGCGTGGCGAAGTTAACGTAACGGATCTGGTGGATGCAAAATTGCTGGAACCTTCGGACGTGGATCACCTGAGAGAGGGCAAGATTACCAGCCAAGACATTGAACACAGGCTTCGGGCTTATCTCCGAGGGTCAACTTGCATTGCTGGGATTTATGATGAGGCCAACGACTGCACCTTGCCTATCTACCAGGCCATGAAGAATGGGCTTCTGCGACCAGGCACTACCTTGGAGCTTCTGGAGGCCCAGGCCGCCTCAGGCTTCATGATTGATCCTATTAACAATGAGTACTACACAGTCGAGGAGGCCTGTAAGAAAGGACTGGTGGGTGTGGAGTTCAAAGACAAGCTTCTGTCTGCCGAGAGAGCAGTAACTGGGTACAAAGACCCAGGCACCGACAAGATGATTTCCCTTTTTGAAGCTATTGAACGGGGTCTCATAGAGAAAGGTCATGGCATTCGCCTGCTTGAGGCTCAGATTGCTAGCGGTGGCATTATTGACCCTAAACACAGTCATCGAATTGATGTTGATGTGGCGTACCAAAAAGGCTACTTTGGTGAAGAGATGAACCAGATTCTGAAAGATGAAGGAGATGACACAAAGGGTTTCTTCGACCCAAACACAGAGGACAATTTAACCTACTTGGAGCTAAAGAGCCGCTGCATCACAGATAAGAAGACGGCGCTGGTGCTTCTGCCTCTTCATGATAAGAAAAAGATGCAGCAGAAGAACTCCAAGAGGAAGAGACGGGTACTGATAGTTGATCCAGAGAGTAATAAAGAAATGACGGTGCGTGAAGCCTATGAAAAGAAACTCATAGACTATGAGACCTTTCTGGAATTGTCTCAGCAAGAGTGCGAGTGGGAAGAAACAGTCATCACTGCTGCCGATGGCTCAACCAGTACAGCTATAATGGACATGCAAACAGGCATTCAGTACGACTTGAAAGACCTGCTTGTGAAGGGAGTGATTAACCAAGATGTTCTTGATAAATATCGTTCAGGAAGTGTCACCCTTACTGAGCTTGCAGATATTATCACCAACAAGGCAAAGACCCTCAGCTCCTCCTCATCATCATTCTCATCCCAAAAGACCATGAAAAGTCAGACAATTAAAACTGAAACTCTTAAAGCAGTCGAGAGCATCTCCACTCAGCAAGATCCATCCTCGGCAAACTCCACCAAGCATATTTCCAGCATGTCAATCAAACTGACCCCATTAGTAGAAACAACTGAGGAACAGAATCCAGTCGGAGCAATTTTTGACACAGAGAAGCTGGAGAAGATCAGCGTGTGTGACGCTCTGAAGCGAGGAATCCTCGATTCCATCACAGCACAACGACTCCTGGAGGCACAAGCTTGCACCGGTGGGGTTGTGAACCCTGAAAATGGTCGCCGCATGTCTATTCAGGAAGCAACCCGCCTCGGTGTCTTGGATGATGAAATGGCTAACAGGATAAAACCTGCCCAGAAAGCCTATATTGGTTTTGAAGATGTGAAAACCAAGCGTAAAATGTCAGCCGCTGAGGCAGTCAAAGAAAAGTGGCTTCCGTATGAGGCTGGTCAGCGCTTCCTTGAATTCCAGTATTTAACCGGCGGGCTGTTCGACCCAGAGCTTGGGAGCAGGCGTTCGCTTGAGGAAGCTTTGCAGCTAGGCTGGCTGGACATGAGAGCGGCTCAGAGGCTCCAGGATACACGTCACCACCCCAAGACCCTGACCTGCCCCAAGACCAAGCTAAGGATATCCTACAAGGAGGCTATGGAAGGTTGCATGAATGAGGAGAACACAGGGGTCCGCATGCTTCCCGCCGCCACGGTTTCATCACGTGGAATCAGCAGCCCCTACAACCTCTCCAATCCAGGATCCGCCTCAGGCTCTCGGAGCGGATCCCGTAGGGGCAGCGTAGACTACACTTTATCCCCTTCTTCATCTTCCAGATACAGCAGCTTTAGCTACAGCAGAACATCTTTCAGCAGCAGATCACTCTCCTAAACAAACATTATGTACTACGCAACATTATATAATGCATCAAAGTATTTTAAGATAACATCACGAGAAAATTAGTAACATTTTAATAATCATTGAAAATGTGAATGGTGTTCCAAACAAATCAGCATTTTTTTTTTTTACCACCTTATGCACGTTTGGAAAACCAATAGCATTTAATGTTTCTTAAATCTATATTAAATGTATTAATCCAGAAATATACACTTTTAATTTTGTCTGTTTACTCACATTCTGGGTGTTTATCTACTTCTGAATTTTATTAAACAGATATGAAAGTTGTTTATAGCACTGGATGGGTAAAGATGTCTTTTCTGTTTTTGTTTTTACACTAATACTGTTGAATTGCTGTATTTTTTTTTCTTCTTCTTGAAAGTTTTAGTGCCTTCACTTTTCCTTCACTGTACTAGCGTGAATTACTCAGTGAAGTTAATAACTTACAGTGTCTGACTTCTTTTCTTACAGTTTTATTGCTCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08100383_08125091.mRNA True 8016 mRNA 0.49 20 8099888 8125091

Neighbor

gene id symbol gene type direction distance location
CI01000029_08092122_08094899 NA coding downstream 4989 8091667 ~ 8094899 (-)
CI01000029_08083189_08089291 TBC1D7 coding downstream 10597 8082757 ~ 8089291 (-)
CI01000029_08041274_08048935 NA coding downstream 50461 8040747 ~ 8049427 (-)
CI01000029_07946659_07953611 TSTA3 coding downstream 146277 7946402 ~ 7953611 (-)
CI01000029_07850412_07853905 NA coding downstream 245871 7850180 ~ 7854017 (-)
CI01000029_08178470_08183999 PSMG4 coding upstream 53329 8178420 ~ 8183999 (-)
CI01000029_08185095_08190376 NA coding upstream 59938 8185029 ~ 8190376 (-)
CI01000029_08205518_08214627 NA coding upstream 80379 8205470 ~ 8214627 (-)
CI01000029_08229070_08234969 CTSBB coding upstream 103874 8228965 ~ 8234969 (-)
CI01000029_08237701_08245368 FDFT1 coding upstream 111826 8236195 ~ 8245368 (-)
G156736 NA non-coding downstream 169545 7929759 ~ 7930343 (-)
G156661 NA non-coding downstream 370683 7728966 ~ 7729205 (-)
G156659 NA non-coding downstream 380851 7718713 ~ 7719037 (-)
G156633 NA non-coding downstream 446147 7643283 ~ 7653741 (-)
G156718 NA non-coding upstream 95299 8220390 ~ 8226568 (-)
G156850 NA non-coding upstream 142309 8267400 ~ 8267662 (-)
G156851 NA non-coding upstream 145661 8270752 ~ 8271021 (-)
G156852 NA non-coding upstream 146358 8271449 ~ 8271686 (-)
G156495 NA other downstream 730341 7365007 ~ 7371921 (-)
G156542 NA other downstream 928937 7170367 ~ 7170951 (-)
G154415 NA other downstream 3112463 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 3622676 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 4392636 3698572 ~ 3707883 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_018494 dspb coding NC_007131.7 CM002904.2 52851793 ~ 52882881 (-)