CI01000029_08463083_08479077


Basic Information

Item Value
gene id CI01000029_08463083_08479077
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8462992 ~ 8479190 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08463083_08479077.mRNA
ATGAATATCTAACACAGTACAAAATGTATAGCAGAGTCTGTATATTCCAGATGGAGACGCACACGACTGAAAAGTGAGCGAGACGTGAGATGAGACTGCAGCGTACCTACAGGATGAACAAGTGTTTCCTGCTGCGCGCGAGTCTCCTGCTGTCGCTGCTGTGCGTCTGCGCTCACGTCTATGTGGAGCTTAATGGCTTGTGTCTGACGGCGGCGGTTCGACTCCAGAAACAGACCCCGAATCGCAGGCATCAGAAGGCCGTTACCAGGGCAGCTTTGGCTGATGCTGCATCCACGTGCTGCCGGCCGCTGAAACATCACAGACAGATTCCTAGATGGAAGATCGACCTTGAACCGTGGGCCGCAGAGACGCGCGGCTTACAGGAGGAAGCCGATCGATTCCTCAGATACATCTCTACACCGCAGGTGTCCTGTGAGAGACCAGCGTCGGCACCGCCCATGCTTGACAGAGAGGATCATGGGTCTTGGGTTCTGTGTTTGGACCGCCGGTTCAGTCTGGCCGAGCGTATCGCGTCGAAACGCTGCCGTGTGTATTCGCTCAGGTTAGGAGCGGAGGATGATGGTCTGGAGCGGCTGTTAGCCGGATCAGGCTGTGAGGTTCACTGCTTCGACCCCAGTATCAGAGGAGCTCACCTGCAGGACGCACACATGTGGCTCCACCGGCTCTCCGTCGACTGGAGGGACCCGAACCCCGCCGTCCCGGCCCAGAGACTCCACAGCGGCACCAAGAAACTCGCCGCCATCCTCAACGACTTCGGCCACAGACAGGTGGATGTCCTGAAGGTGGACCTGGAAAGTGCCGAGTGGAAGATTCTGGAGAACCTGATTCTGGAGCAGGTGCTGGACTCCATCGGCCTGCTGCTGCTGGAGCTGCACCTGCACTGGGCGGGGTTTGAGGTGGGCGGAGACGAGCCCTCGGTGGTCCGCTATTGGTTCAGCCTGCTCAGGGAGTTGGAGCGCGCTCATTTCCGCCTCTATCACAGCTACAGCGACCCGACCAAACCACGCCTGTTCCTGCACAGAAACCTGCAGAACACCAGCAGCTCCTTCGTCCTGGGATGGGTGAACACTCAGTTTGTGCCGCGAGGATGATCAGGCTCTGTTCTGAAGAGAAACACTTCATAACGCAAACCCAGCGGTCTTGGGTTGATTAGTGCGACGTTCTCAACAGTGTGTGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08463083_08479077.mRNA True 1203 mRNA 0.57 5 8462992 8479190

Neighbor

gene id symbol gene type direction distance location
CI01000029_08384203_08407906 NA coding downstream 55086 8382870 ~ 8407906 (-)
CI01000029_08250264_08262665 GATA4 coding downstream 200327 8250249 ~ 8262665 (-)
CI01000029_08237701_08245368 FDFT1 coding downstream 217624 8236195 ~ 8245368 (-)
CI01000029_08229070_08234969 CTSBB coding downstream 228023 8228965 ~ 8234969 (-)
CI01000029_08205518_08214627 NA coding downstream 248365 8205470 ~ 8214627 (-)
CI01000029_08568672_08576837 SLC25A29 coding upstream 87841 8566372 ~ 8577143 (-)
CI01000029_08606896_08609369 NA coding upstream 126316 8605506 ~ 8610176 (-)
CI01000029_08690880_08711534 PPP2R5CB, PPP2R5C.L, PPP2R5C coding upstream 211135 8690325 ~ 8711919 (-)
CI01000029_08713541_08717320 NA coding upstream 233998 8713188 ~ 8717320 (-)
CI01000029_08722756_08730839 HSP90AB1, HSP90AA1, HSP90AA1.1, HSP90AA1.2 coding upstream 243309 8722499 ~ 8731563 (-)
G156727 NA non-coding downstream 81535 8380726 ~ 8381457 (-)
G156738 NA non-coding downstream 93700 8365066 ~ 8369292 (-)
G156902 NA non-coding downstream 98640 8364127 ~ 8364352 (-)
G156900 NA non-coding downstream 99770 8363011 ~ 8363222 (-)
G156913 NA non-coding upstream 19068 8498258 ~ 8503179 (-)
G156919 NA non-coding upstream 37927 8517117 ~ 8517370 (-)
G156831 NA non-coding upstream 281555 8760745 ~ 8761214 (-)
G156947 NA non-coding upstream 301573 8780763 ~ 8781076 (-)
G156495 NA other downstream 1093445 7365007 ~ 7371921 (-)
G156542 NA other downstream 1292041 7170367 ~ 7170951 (-)
G154415 NA other downstream 3475567 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 3985780 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 4755740 3698572 ~ 3707883 (-)

Expression


Co-expression Network