CI01000029_09266806_09267723


Basic Information

Item Value
gene id CI01000029_09266806_09267723
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 9265396 ~ 9267736 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_09266806_09267723.mRNA
ACCTGAGCTGAAGATGGAGGGGATGTACGTGGAACTTCTGGCTTTGAGGATCGTCATCTCTATCGTTGGCGTCGTAGGAAACACAGTCTTGATCATCTCCATCCTTCAAACGACGCGCCTGAAGTCCTTCGAGATCTTTCTTCTCGGTCTAGCTGCAGCAAACCTGGAGGAGATCATGATCGTGGACATTTATGACATCTTGCTTTTTCGCTCCTCGTACAGGATGAGCGCCTGGACTTGCAGGGGCCTCAAATTCCTCACCATCTTCGGCGAGATCGGCAGCATCCTCTTCACGGTCCTCATCAGCGTTTACCGCTATCAGAAGCTGCGAGACGTGCACACGCGGGTCAACCTGCCCGTCTTCATGGACAGCCTGCGCTCGGCCGGCGTTCTCGCTGGGTTTTGCGCCACGGTGGCTTTGCTCTTCTGTTTGCCCACGCTTCTGGTAAACCTGGATTGGAGTCACCCAAACTCTTCCTCTCCGTCCTGTCCGGTCGATTTCTTCCAGTGCTCGTCAACCAGGTGCCCGACTCGCAACCGCATCTACAAGTACTCCTTCATCCTGGTGTGTAACCTGCTGCCTCTGCTTATAGTCACACTAACGAGCAGCATGATCGTCAGGATTTTAATCGTTCAGCAGAAGGCGGTGAGGGTCCGGCAGGGTCCGAGTGTCGCGACGACGACGACAGCCCAACAGCGGCCCAAGAAGTTGGGCTTCCAGCGAAGTACGCTGGCCATCCTGATGGCCATGACGCTCTTCCAGGTCAACTGGAGCGTCTATCTGATCCTGCATCTGGCGTGTGATCCGTACAGCTTCCCGGCCTGGTCCGAGGTGGAGTTCTTCATCACCACCTTCTACACGGCCATCAGCCCGTATGTGTACGGCATCGGCAACAACCTTTTCAACCTGAAGCGCTTCATGGGTAGATAAGAGGTTTAGTATAAATATGAAGCATTTAAGCATTGTGATGGTTTTATATGGAACAATAACAAGAAACAAAGCTGTGCGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAGTACATACATACATACATATAAAGTATATGGTAACACTTTCCAATAAGGTTCCATTAGTTAACATGAACTAACAATGAACAATACTTCTAAAACGTTCATTAATCTTATGTTAATTTGAACATTTAATAATACAGTGATGTCCAGAGGTGATATTCCCTACAAGTTCAATTAAACCATCAAATGTGGAAAATATTGTATATATATTTTAAAGATAAGGACAGAACAAAACACTGAACATGGTTAAGGTGTTTATCTGACAACATTATTCAGCAAAAAATGAACTAACATGAACTAATAAAGAGCACTATATTTCTACAGTATTTGTACATCTTTGTTAATGTTAGATAATAAAAAATGTTCATGTTAATTCACAGTGAATTAACTATTGTTAAAAGACAACTTTTGATCTTAATGTATTAGTAAATGCTGAGATTAAGATGAACTATGATTAATAAATGCTTTGTTCAGTGTTTGATCATGTTAATTAATGGTAATTAATGAAATCGCTACAGTTCCTTCTTTTGTTGTGATTTTGATTCTGATGTTTCTGTCGAATGATAATCTGTTGTTTATAAATGACGTTTGATATGTGTTGTGATGATGATGATGATGATGATGTATTCTCATTGACTCTATAAATGTTGAGAGTTGTTGTTTCGTCATTGTTTACTGTTGTCAAAACAGTTAAATTATCACACTGATATTTCAAAGGTTCGATTAAAGGAATAATTCACCCAAAATGAAAACTGCCTTATTTACTTGCTCTTTTGTCTCTCATATGCTTTATATTTAAAATCAGCATGAAAGGGAAGTTTCGCTGGTCTTTTCTACCGTATATCTGAGTGAAATGCTTCTCAAACAAGAACAAATGTAGGGAGGGGCTTGATTTTGTCTGTGGGGAATTGATTGGATGGTTGTGGTTTGCTATTGGTGGATCTCATGTGAGTGACACATTTGGATTTTATGGTGACTTTAATCCTTTAATCAAATCAGTCAGAAGTGTTGTTGACGTGCGTGTGTGTGTGTGTGTTTCTGCCTGTTTAGAGGAGGTTCATGTTTCATTCCCAGCAGAAGCTTTAGTGTTTGTGTGACGAAGGAGAGTAAATGATGTGATGAGATGTTCTGATGTGTTCTTCTCTTCAGTCATTACAGTGACACACAAAGCTGTTGTGTGGCTTTGATGGAAGATTCTTGGGCTTTTTTAAGGAAGAATATGTTAGACACGGCTCAAAAACAGGTTATGTTTTCTTTACTGATGGACTTACATGATCAATAAA

Function

NR:

description
vomeronasal type 1 receptor 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_09266806_09267723.mRNA True 2341 mRNA 0.42 1 9265396 9267736

Neighbor

gene id symbol gene type direction distance location
CI01000029_09256349_09260500 NA coding downstream 3027 9255954 ~ 9262369 (-)
CI01000029_09241423_09246886 NA coding downstream 18510 9241294 ~ 9246886 (-)
CI01000029_09224569_09226329 NA coding downstream 39067 9224290 ~ 9226329 (-)
CI01000029_09218366_09222084 NA coding downstream 43312 9217814 ~ 9222084 (-)
CI01000029_09212269_09216732 YY1A, YY1.L, YY1, YY1.S coding downstream 48664 9210827 ~ 9216732 (-)
CI01000029_09300363_09303399 NA coding upstream 32526 9300262 ~ 9303399 (-)
CI01000029_09362545_09363909 NA coding upstream 93730 9361466 ~ 9364306 (-)
CI01000029_09371783_09394715 PLCB4 coding upstream 104047 9371783 ~ 9395151 (-)
CI01000029_09399992_09440921 NA coding upstream 131877 9399613 ~ 9440921 (-)
G157028 NA non-coding downstream 20860 9244327 ~ 9244536 (-)
G157027 NA non-coding downstream 23319 9241829 ~ 9242077 (-)
G157026 NA non-coding downstream 61690 9203351 ~ 9203706 (-)
G157014 NA non-coding downstream 109734 9152396 ~ 9155662 (-)
G157013 NA non-coding downstream 142961 9122211 ~ 9122435 (-)
G157043 NA non-coding upstream 39796 9307532 ~ 9308634 (-)
G157046 NA non-coding upstream 55177 9322913 ~ 9325470 (-)
G156495 NA other downstream 1895849 7365007 ~ 7371921 (-)
G156542 NA other downstream 2094445 7170367 ~ 7170951 (-)
G154415 NA other downstream 4277971 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 4788184 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 5558144 3698572 ~ 3707883 (-)

Expression


Co-expression Network