G154368


Basic Information

Item Value
gene id G154368
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 4973178 ~ 4973526 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU175265
GTAGAAGAGTATTGTGAGAGAGATATCGAGTGACCGAGTTTATTACCTGCATTCAGATTTAGCATTTTCCTTCAGGTCAGTCCTATGTTCATAATAAAAAATCCATTTGAATGTCTGCTGCGACCTTGTCCTTTTAACATTTAATGGGTTTTCCCGTGCCCTGCTGACACTGACAGCGCTAGTCAAAGCATTTGTCATTTGCGTCTTGTTCCGTGTTCACAACAAGTTTCAATATAAAAGTCTTTGCGACTGAGTGACTCGCTCATAAAGACAATCTTTGCCGCCATCTAATGGCGTAATAAATGTAACTTCTGTTGCTGTTCACGGTCAGGGACTATTTTTTTCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175265 True 349 lncRNA 0.41 1 4973178 4973526

Neighbor

gene id symbol gene type direction distance location
CI01000029_04590418_04605290 NA coding upstream 367484 4590284 ~ 4605694 (+)
CI01000029_04521600_04521771 NA coding upstream 450427 4521600 ~ 4522751 (+)
CI01000029_04478628_04483582 NA coding upstream 489577 4476420 ~ 4483601 (+)
CI01000029_04409794_04419021 OPN8B coding upstream 554157 4409794 ~ 4419021 (+)
CI01000029_04389599_04399047 OPN8A coding upstream 574113 4389599 ~ 4399065 (+)
CI01000029_04981453_04995255 NA coding downstream 7619 4981145 ~ 4995662 (+)
CI01000029_05041887_05044363 NA coding downstream 67471 5040997 ~ 5045063 (+)
CI01000029_05104260_05107686 BMP2B coding downstream 129693 5103219 ~ 5107804 (+)
CI01000029_05232703_05233677 TAAR11 coding downstream 256666 5230192 ~ 5234070 (+)
CI01000029_05267765_05268790 TAAR64, TAAR13E, TAAR13D, TAAR13C, TAAR13B coding downstream 294164 5267690 ~ 5268884 (+)
G154366 NA non-coding upstream 9610 4963348 ~ 4963568 (+)
G154361 NA non-coding upstream 13470 4959495 ~ 4959708 (+)
G154360 NA non-coding upstream 19268 4953703 ~ 4953910 (+)
G154358 NA non-coding upstream 23613 4949304 ~ 4949565 (+)
G154353 NA non-coding upstream 32475 4940467 ~ 4940703 (+)
G154371 NA non-coding downstream 3202 4976728 ~ 4976986 (+)
G154372 NA non-coding downstream 3705 4977231 ~ 4977523 (+)
G154341 NA non-coding downstream 13236 4986762 ~ 4987398 (+)
G154378 NA non-coding downstream 32144 5005670 ~ 5005961 (+)
G154334 NA non-coding downstream 43909 5017435 ~ 5018652 (+)
G153790 NA other upstream 233071 4733589 ~ 4740107 (+)
G153475 NA other upstream 1411174 3545125 ~ 3562004 (+)
G152451 NA other upstream 2210239 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 3445279 1526754 ~ 1527899 (+)
G151495 NA other upstream 4601256 366541 ~ 371922 (+)
G154587 NA other downstream 297494 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 483715 5461497 ~ 5470346 (+)
G155079 NA other downstream 1309159 6282685 ~ 6288398 (+)
G155083 NA other downstream 1458009 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 1932662 6905834 ~ 6908633 (+)

Expression


Co-expression Network