G154674


Basic Information

Item Value
gene id G154674
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 5711109 ~ 5711373 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU175604
GCAAGTTTTATTTTTATTACTTTATTTTATTATGGTAGCCTACATGATGAGCACAATATCACTCATATGAACAGAGCTGGAAATGTGAAATTGACCTTTTTCGTTCAGTCCAGTCCAGGTGTCCATCATCAGAGAACCCAAAGAGGCCCGTCAATCATGAAACTGACCTGCACAAGTGTTTAGTGAGCAGTCCTTTAGTCGGTGAAGTGACACTGATGAAAGGGAAATGACCCGCATGTAGGTTAAACAGAACACGACACCAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175604 True 265 lncRNA 0.42 1 5711109 5711373

Neighbor

gene id symbol gene type direction distance location
CI01000029_05695252_05699826 NA coding upstream 11231 5693165 ~ 5699878 (+)
CI01000029_05591971_05597708 NA coding upstream 113267 5591971 ~ 5597842 (+)
CI01000029_05578983_05588654 NA coding upstream 121402 5578632 ~ 5589707 (+)
CI01000029_05577218_05577697 NA coding upstream 132572 5577218 ~ 5578537 (+)
CI01000029_05521742_05525648 FEZ2 coding upstream 185177 5521742 ~ 5525932 (+)
CI01000029_05772821_05785145 NA coding downstream 61448 5772821 ~ 5785381 (+)
CI01000029_06015438_06024591 HADHA, HADHAA coding downstream 304065 6015438 ~ 6025083 (+)
CI01000029_06066859_06073942 NA coding downstream 355486 6066859 ~ 6073974 (+)
CI01000029_06076254_06083211 XKR5 coding downstream 364748 6076121 ~ 6084211 (+)
CI01000029_06086495_06092753 NA coding downstream 375122 6086495 ~ 6093859 (+)
G154572 NA non-coding upstream 139634 5571102 ~ 5571475 (+)
G154564 NA non-coding upstream 256974 5453310 ~ 5454135 (+)
G154536 NA non-coding upstream 259818 5448056 ~ 5451291 (+)
G154620 NA non-coding upstream 283237 5427662 ~ 5427872 (+)
G154511 NA non-coding upstream 286889 5420112 ~ 5424220 (+)
G154675 NA non-coding downstream 8915 5720288 ~ 5721868 (+)
G154900 NA non-coding downstream 146336 5857709 ~ 5858056 (+)
G154905 NA non-coding downstream 148445 5859818 ~ 5861073 (+)
G154910 NA non-coding downstream 155802 5867175 ~ 5867387 (+)
CI01000029_05461497_05468985 BATF other upstream 240763 5461497 ~ 5470346 (+)
G154587 NA other upstream 439574 5271020 ~ 5271535 (+)
G153790 NA other upstream 971002 4733589 ~ 4740107 (+)
G153475 NA other upstream 2149105 3545125 ~ 3562004 (+)
G152451 NA other upstream 2948170 2761594 ~ 2762939 (+)
G155079 NA other downstream 571312 6282685 ~ 6288398 (+)
G155083 NA other downstream 720162 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 1194815 6905834 ~ 6908633 (+)
G155522 NA other downstream 1923460 7634833 ~ 7637834 (+)
G155627 NA other downstream 2220107 7931480 ~ 7932177 (+)

Expression


Co-expression Network