G155032


Basic Information

Item Value
gene id G155032
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6162651 ~ 6163392 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176038
GCATTTATTAATCTTTGTCAACATCAGTTAATAAAAATACAACTGTTCATTGTTAGTTAATATGAACTAAGATTCATTAAATAATATTAACGGATACAACGTTTTATATTTGTATTAGTAAATGTTGAAATGAACATTAAGACTAATAAATGCTTTAATAATGTATGGCCTCTTAGGGCCTCCGTATTCATGTGAACTAATGTAGTTAACTAATGTTAACAAATGAACCTTATTGTAAAGTGTTACCAACTTATGAAGGTCATTTTACTAAATGGATGCCATTTGTAAATCACTTTGCATGTCTTCTTCACCACTGAGTTTTCCCTACCAAAGTTTTTCCATAGGCTACATAATAATATCCCAACATAGGCCTATATTAATTGATCTTACCGACACAAGGTAGTTTAACACTTAAACAGTGCATCACCTTATTTAACTGTAAAAGTCAGCAGTTTAAAAAAAAAAAAAAAAAAAATCTCTCACGAGCCTCGTCGTTAAAATCTCTTGATGTTTCTCCAGAGCTGTAGAGACATCTGTAGGTCAATATGAAGAACTGCAATAAAGGCCTATTCACACTAAGAACGATAACTATAAAGCTAAACATATTAACAATAACTATATTTGCGTCTACGCCAGCGGACAACTTTCTGTTTATTATATGCGCTCGCTGCAGTTATGTCGTCTGTCGCTTTAAAGAGATAGTTCACCCAAAAATGAAAATTCTGTCATCATTTACGTACCC

Function

NR:

description
PREDICTED: BTB/POZ domain-containing protein 17-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176038 True 742 lncRNA 0.32 1 6162651 6163392

Neighbor

gene id symbol gene type direction distance location
CI01000029_06086495_06092753 NA coding upstream 68792 6086495 ~ 6093859 (+)
CI01000029_06076254_06083211 XKR5 coding upstream 78440 6076121 ~ 6084211 (+)
CI01000029_06066859_06073942 NA coding upstream 88677 6066859 ~ 6073974 (+)
CI01000029_06015438_06024591 HADHA, HADHAA coding upstream 137568 6015438 ~ 6025083 (+)
CI01000029_05772821_05785145 NA coding upstream 377279 5772821 ~ 5785381 (+)
CI01000029_06214396_06222690 NA coding downstream 49486 6212878 ~ 6222735 (+)
CI01000029_06294088_06295613 NA coding downstream 129627 6293019 ~ 6296026 (+)
CI01000029_06305668_06307332 NKX2.4B coding downstream 141853 6305245 ~ 6307675 (+)
CI01000029_06347167_06348123 NA coding downstream 183268 6346660 ~ 6348169 (+)
CI01000029_06443365_06447942 CRNKL1 coding downstream 279973 6443365 ~ 6447942 (+)
G154997 NA non-coding upstream 62462 6099762 ~ 6100189 (+)
G154996 NA non-coding upstream 68473 6079615 ~ 6094178 (+)
G154982 NA non-coding upstream 83053 6017523 ~ 6079598 (+)
G154980 NA non-coding upstream 159306 6003144 ~ 6003345 (+)
G154978 NA non-coding upstream 160955 6001412 ~ 6001696 (+)
G155041 NA non-coding downstream 288 6163680 ~ 6163917 (+)
G155060 NA non-coding downstream 82291 6245683 ~ 6245975 (+)
G155061 NA non-coding downstream 82946 6246338 ~ 6246643 (+)
G155072 NA non-coding downstream 98783 6262175 ~ 6262474 (+)
G155087 NA non-coding downstream 159699 6323091 ~ 6334951 (+)
CI01000029_05461497_05468985 BATF other upstream 692305 5461497 ~ 5470346 (+)
G154587 NA other upstream 891116 5271020 ~ 5271535 (+)
G153790 NA other upstream 1422544 4733589 ~ 4740107 (+)
G153475 NA other upstream 2600647 3545125 ~ 3562004 (+)
G152451 NA other upstream 3399712 2761594 ~ 2762939 (+)
G155079 NA other downstream 119293 6282685 ~ 6288398 (+)
G155083 NA other downstream 268143 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 742796 6905834 ~ 6908633 (+)
G155522 NA other downstream 1471441 7634833 ~ 7637834 (+)
G155627 NA other downstream 1768088 7931480 ~ 7932177 (+)

Expression


Co-expression Network