CI01000030_03915675_03916993


Basic Information

Item Value
gene id CI01000030_03915675_03916993
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3915286 ~ 3916993 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03915675_03916993.mRNA
TTATAAAAATGCTCAGTATAATGAAAAAAAAAAAAATGCTTAGATTCATGTTTGACACAAATTTAGCTCAGTGCATGAGCAAAGTGCAAATAAGCATATCATCCCATGCCATGACAGTAAGAGGTACTAGTCTAGAAAAAACTGGTTCCTTATTTTCAAATTTCCTTATTTGAAAGTACAGTGAACAGATGTGCACAAAATGCACTCAGCTTTTCCGCTGCCAACCTCAGATGGTAGATATGCTGTGGCAATGTCTGAGAGAGCGACAGAGAGAGTAAGTGAGATAACTGCGTGTGTGCTAATGCACTAGAAGAAAACTACAGGAACTAACATTTGTAGGAGGGTGAAGCACATTGACGGACGGTCACACTGTCACACGCTAATCTACAATGGATCAAGCAACAGTCTACACTCTCATGGGAGCATCAGGAGGGGCATCGCCACCTGCACTGCCCATCAAACAGCGCAGGAGCACGTCTTCTTCGAGCTCCATCCATGATCTAGATCTGAAGGTGGAAGATCTACTTTTGTCAGGACCACAGACCCCTGTGTCTCCATTTGCTGAAGTGTTCACTCCTACCTACTGCAATGCAGCCCACTGTCCAATACATCGTCGCTACGAAAATCACCAGACAAGATTCTTCTCAGATCAAAATCCTCCTCCAGTACCCAAAAAGAGTCTGAAGAGAACCCTATCCCTCCCAGTGGAGGCTCTGGACCCATCTTGCCCAGAACATACAGGAGCCTACAACTATGAAAATCCATTATACATGATAGCACCTTTCCAGAGCACACTTACACTACAAGAGGAAGAGGTACAAGATGAGCTACATCAAGGTCCATCCTTGCACAAGGTGAACTTTGATACACCAGATGAGCAACTTCAAAGAGTCTTCGCAAGCTTCCAGAGCCATGAGCAAGTTTCCATGGGTATTCAAGAGTGTTATCTTCAGTTTCTGAGTAGCACGTTGCAAAACATTGAATCGAGCATCTTCCCTAATGAACAGGAAATGGAGATGGCAAAGACATCTCAGCCTAATGACTTTATATTGTGTGAGCAGCAGTGGCCTGAGAGGGATGCTTTCTACTTGGTGCGCTGTTCAAAGGTTCCTGGGAGACTGTTTTCAGCAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03915675_03916993.mRNA True 1133 mRNA 0.44 3 3915286 3916993

Neighbor

gene id symbol gene type direction distance location
CI01000030_03909138_03910046 NA coding upstream 5240 3909038 ~ 3910046 (+)
CI01000030_03838027_03838812 NA coding upstream 74341 3836328 ~ 3840945 (+)
CI01000030_03825765_03826754 NA coding upstream 88492 3825415 ~ 3826794 (+)
CI01000030_03765594_03778884 ONECUT3, ONECUT3A coding upstream 136254 3765062 ~ 3779032 (+)
CI01000030_03744173_03745628 FOXQ2 coding upstream 169545 3743491 ~ 3745741 (+)
CI01000030_03917423_03918481 NA coding downstream 430 3917423 ~ 3918674 (+)
CI01000030_03926592_03926762 NA coding downstream 9599 3926592 ~ 3927205 (+)
CI01000030_04070253_04083457 NA coding downstream 152454 4069447 ~ 4083892 (+)
CI01000030_04163915_04171784 CRLF1B coding downstream 246922 4163915 ~ 4171907 (+)
CI01000030_04183583_04213798 CPAMD8 coding downstream 266590 4183583 ~ 4213798 (+)
G159490 NA non-coding upstream 6797 3906081 ~ 3908489 (+)
G159561 NA non-coding upstream 71290 3843788 ~ 3843996 (+)
G159556 NA non-coding upstream 90735 3824287 ~ 3824551 (+)
G159553 NA non-coding upstream 95240 3819821 ~ 3820046 (+)
G159552 NA non-coding upstream 98287 3816762 ~ 3816999 (+)
G159593 NA non-coding downstream 17130 3934123 ~ 3934444 (+)
G159604 NA non-coding downstream 57237 3974230 ~ 3974587 (+)
G159631 NA non-coding downstream 109541 4026534 ~ 4028557 (+)
G159714 NA non-coding downstream 211390 4128383 ~ 4128777 (+)
G159727 NA non-coding downstream 221990 4138983 ~ 4139239 (+)
CI01000030_03018776_03042194 FGF22 other upstream 871513 3018776 ~ 3043773 (+)
G158416 NA other upstream 1300993 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 1632916 2277208 ~ 2282743 (+)
G157726 NA other upstream 2277059 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2908599 1003114 ~ 1003795 (+)
G159685 NA other downstream 514807 4431800 ~ 4488526 (+)
G159816 NA other downstream 599785 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 3282942 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3937092 7868292 ~ 7886228 (+)
G162088 NA other downstream 4320972 8237965 ~ 8239604 (+)

Expression


Co-expression Network