CI01000030_10304328_10313568


Basic Information

Item Value
gene id CI01000030_10304328_10313568
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10304328 ~ 10313627 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10304328_10313568.mRNA
ATGAAACCTTGTGAAGCTCTGAGGATATACTGGGAACAGCGCCATCTGCTGGCTGGTGTGGTTGGTAACACATCTGGATTGAACTTGGTATTAGTGATGGAGGGAGATTCTGTCCCTCTAAACACTGGTGTCACCAAACAACAACGTGACAAGATGCTGTGGTATTTTAATGACACTCTCATAGCTCTGATCAATGGAGAGGCCAGTAAGAGCTGTTTATATGATGGTGAAGGCGGGAGATTCAGAGACAGACTGGAGGTGGACTATGAGACCGGATCTCTGACCATCACAAACATCGGCCTTGAACATGCTGGACGTTTTGAAGCAAATTTCATCCAAAGCAAGAGCTCAGGAACCAGCCACAGCTTGAACAGAAACAGCAAATGTGACAGCACAAAGATCACCAGAAAACTGAGCAATATTGGCGACACCATTAAAACATTCAGTGTTTCCGTCAGAGCTTCTCTGTCTGTTCCTGACAAAACCGATGAAGAATGGTACGAGATAGAGAAGGAGCAAGAGCGTGACAGGAGTCTGCCTTCAAATCTTATAGTCGGAATAGCTGTTGCTGTTGTTCTGTTGGTGTGTGTATCTGTAACAGCTGGTGTGATTTACTATCGCCGCAGAAGCTCTAAACATGGCAAGTATCACCTACAGATACTGTACTCCAAACGTTCTTGGCAGCAGATCAAGACAAACTATAAAAATATAATACAGAGTGCCAATAGAAAAAAGTGTGAAATTCGGAAAACTGGGGGAGGGCCACCTCCTCCAGAATATACTGTGGCAGAGGAGTTGGCTCTGAGTTTTAATAAGGAACAGCCCATTATGGATGGGGTTACAGGGGCTGTACAATCAAGTGACGCTTGTAGAGGGAAATACAGTGTCCCTGTTGAAGCCAGCACACATGCACAGAGTCTCTCACACAGAGGTGGAAACAGACTCAGCCAGGGCCCTTTACAAAAGGAGCCTTGAACTGGACTGCACACTGAAGGAGCTAGACTGTGAGCTGAGGAGACTCCAAATTAAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10304328_10313568.mRNA True 1034 mRNA 0.46 8 10304328 10313627

Neighbor

gene id symbol gene type direction distance location
CI01000030_10259762_10274068 NA coding upstream 30159 10259714 ~ 10274169 (+)
CI01000030_10246173_10256836 NA coding upstream 47416 10244410 ~ 10256912 (+)
CI01000030_10199403_10226165 NA coding upstream 77448 10199111 ~ 10226880 (+)
CI01000030_10178017_10185588 NA coding upstream 116209 10175476 ~ 10188119 (+)
CI01000030_10164557_10167430 NA coding upstream 134946 10164364 ~ 10169382 (+)
CI01000030_10333687_10335629 NA coding downstream 19891 10333518 ~ 10335792 (+)
CI01000030_10422761_10426202 NA coding downstream 109025 10422652 ~ 10426252 (+)
CI01000030_10473378_10509560 NA coding downstream 158208 10471835 ~ 10511071 (+)
CI01000030_10537146_10539791 NA coding downstream 222564 10536191 ~ 10540258 (+)
CI01000030_10540503_10543066 NA coding downstream 226669 10540296 ~ 10543215 (+)
G162650 NA non-coding upstream 5134 10284663 ~ 10299194 (+)
G162633 NA non-coding upstream 66045 10228644 ~ 10238283 (+)
G162632 NA non-coding upstream 66674 10237126 ~ 10237654 (+)
G162634 NA non-coding upstream 109127 10194097 ~ 10195201 (+)
G162334 NA non-coding upstream 172757 10115690 ~ 10131571 (+)
G162319 NA non-coding downstream 1512 10315139 ~ 10316965 (+)
G162408 NA non-coding downstream 30654 10344281 ~ 10354263 (+)
G162661 NA non-coding downstream 43476 10357103 ~ 10372898 (+)
G162662 NA non-coding downstream 44415 10358042 ~ 10358319 (+)
G162401 NA non-coding downstream 109302 10422929 ~ 10429547 (+)
G162297 NA other upstream 83104 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 258445 10039358 ~ 10047210 (+)
G162449 NA other upstream 947314 9356403 ~ 9357014 (+)
G162137 NA other upstream 1732602 8568010 ~ 8571726 (+)
G161986 NA other upstream 1756003 8544582 ~ 8548325 (+)
CI01000030_10738658_10751094 NA other downstream 424954 10738087 ~ 10751548 (+)
G162821 NA other downstream 552385 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 1027128 11362114 ~ 11380772 (+)
G162951 NA other downstream 1178974 11492601 ~ 11496119 (+)

Expression


Co-expression Network