CI01000030_10422761_10426202


Basic Information

Item Value
gene id CI01000030_10422761_10426202
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10422652 ~ 10426252 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10422761_10426202.mRNA
GTATAATATCTCTGGCTGAGGGTGCGGCTCAGAAACGGATCTCTGACGAACAATCAGAGGACTGTAATAACTTCAAGGATCATATCTCTTCACGCAACTGTACAACAAGATGAAGAGCGCACTTATACTTGTTCTTTCCTCATTATTCGCGATCGGTGTGTTTGGTGAGTCAGTGTCAGTGAAGGAGGGAGGGTCACACACTTTACAGACTGGCATTACAATACAGGGTAGTGATGAGATAGAGTGGAGGTTAAATGAAATGCTTATATTTAGAATCAGTAGTGTAGCCGGTAAGATCACAGTATTAGATTCTACCGACGGGGCATTCGGAGGCAGGCTGAATGTGGACAAACAGACTGGAGATCTCAAGATCACAAACATCAAAACCACAGAGTCTGGACAATATACACTAAAGATCAGCAGCACCAAAGGGTCCTCAGACAAGATATTCACTGTCAATGGTCCAGATCCAGGTCCAGGTCCAGGTCCAGGTCCAGATCCAGGTCCAGATCCAGGTCCAGATCCAGGTCCAGATCCAGATCGAGGTCTGTCTTCAGGAGCGATAGCAGGGATAGTTATTGCTGTTCTTGCAGCGGTGGCTGCAGCTGTTGGTGGGATTTACTATGGCTACGGGAAAAAGGGACAAATGTGTAAGTATTACAGCTGAAAAATATTGCTGTAGATTGTAAAGGTGTATCAGATGATGCTTAGTCAGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10422761_10426202.mRNA True 717 mRNA 0.45 3 10422652 10426252

Neighbor

gene id symbol gene type direction distance location
CI01000030_10333687_10335629 NA coding upstream 86860 10333518 ~ 10335792 (+)
CI01000030_10304328_10313568 NA coding upstream 109025 10304328 ~ 10313627 (+)
CI01000030_10259762_10274068 NA coding upstream 148483 10259714 ~ 10274169 (+)
CI01000030_10246173_10256836 NA coding upstream 165740 10244410 ~ 10256912 (+)
CI01000030_10199403_10226165 NA coding upstream 195772 10199111 ~ 10226880 (+)
CI01000030_10473378_10509560 NA coding downstream 45583 10471835 ~ 10511071 (+)
CI01000030_10537146_10539791 NA coding downstream 109939 10536191 ~ 10540258 (+)
CI01000030_10540503_10543066 NA coding downstream 114044 10540296 ~ 10543215 (+)
CI01000030_10567314_10570556 NA coding downstream 138142 10564394 ~ 10570573 (+)
CI01000030_10581114_10588932 NA coding downstream 154361 10580613 ~ 10589621 (+)
G162605 NA non-coding upstream 18636 10106728 ~ 10404016 (+)
G162661 NA non-coding upstream 49754 10357103 ~ 10372898 (+)
G162662 NA non-coding upstream 64333 10358042 ~ 10358319 (+)
G162408 NA non-coding upstream 68389 10344281 ~ 10354263 (+)
G162319 NA non-coding upstream 105687 10315139 ~ 10316965 (+)
G162679 NA non-coding downstream 24237 10450489 ~ 10451083 (+)
G162366 NA non-coding downstream 87636 10513888 ~ 10515816 (+)
G162694 NA non-coding downstream 96052 10522304 ~ 10564317 (+)
G162297 NA other upstream 201428 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 376769 10039358 ~ 10047210 (+)
G162449 NA other upstream 1065638 9356403 ~ 9357014 (+)
G162137 NA other upstream 1850926 8568010 ~ 8571726 (+)
G161986 NA other upstream 1874327 8544582 ~ 8548325 (+)
CI01000030_10738658_10751094 NA other downstream 312329 10738087 ~ 10751548 (+)
G162821 NA other downstream 439760 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 914503 11362114 ~ 11380772 (+)
G162951 NA other downstream 1066349 11492601 ~ 11496119 (+)

Expression


Co-expression Network