CI01000030_11437923_11444045


Basic Information

Item Value
gene id CI01000030_11437923_11444045
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11437627 ~ 11444049 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_11437923_11444045.mRNA
TTATAAAAAACTCCATCATCGACCGTGGGTGATTTAATGGCTAAATTTATGAGGGGGCACATTTGTTCGTATGTTCACTGTATATACGCCAAATAGGCTAAGCAGTAAAGGGAACGAGAATGAAAACAAGAATGCAAAGGTAATAGTAAGCTTTTTGACTTCTCTTTTTACAGCCTTCAGCCTGGAGTGCTCTTGGATCACACAAGTTTGCGTCTGAAGAGCTCATTGGAAAGGAAGAGTTTTATTGTGGGTGAGGCACGTTTAACAGCGCTTCAGGAGTCGCACAGCAGGGGCCAATGGGAGTGTGGAATCTGGCCAAGGTGGTGCTCGGATGGGCTGCGGTCTGGTGGGCAGCAGTCTATTCGGTGCAGGCGCAAGGAGATGGAGACATCCAGGCCAACCGATTCACTGGAAAACCTGAGGGGGAGGTGCAACAGAGGGTCCGTCGGAGAGGCCAGGAGTCCCTCAGGGGTGTAAGAATGCTCCTTAAGAACGCTGATTATGATGATGTTGCACGAAAAGGCACATTTGATCTTCTGCCGAGTCGCCAACCAATCAAGCCAAGTTATCCAGGATTGGAGGAGTCTGATCACATTGCATTTGGGGGCCTCTTAAATGAAGGTAAAGTCTGGGAGACTGCTGTAAAAGCAATGGGCTTGGGGAGTGGTAACCGGTGGGATAGAATTGTGCTATCTTTCTGCGCCCTGTCTAAGATATCCCACAAGCCTCATGGTTGTGTCGTCTGGCAATACGGTTTGAAATCCATCAAAAGAGTCAAACTACAGCTGGTCGTCCCCAGTGAGTGTCCAGGTTTGACTGAGATCCTAAGGGCTTGTTGGAAAGAAACAGCTAAAACGACACGTTCTGAGGCCGATTTGCCTCCAAGCTGTGAATTACCAGTCCTGGTTCAAGTCATACACACTAAACAGCCCAATGTATGTGGTTCCCGCTTTCACTCCTATTGTTGTCCAGGATGGAAAACGCTTCCCGGAGGGAACCAGTGTATAGTTCCAATCTGTAGAAACTCGTGTGGGGATGGTTTTTGTTCGAGGCCCAACATGTGTACCTGCTCCAGTGGTCATCTTGCCCCTAGCTGTGGGGCGGCCGCAGTGGCGTCCAGCCGTTTCTCAGCGAATGCCCGGAATATGTGGTCATAGACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_11437923_11444045.mRNA True 1161 mRNA 0.49 9 11437627 11444049

Neighbor

gene id symbol gene type direction distance location
CI01000030_11382916_11385905 NA coding upstream 51288 11382371 ~ 11386339 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B coding upstream 56855 11362114 ~ 11380772 (+)
CI01000030_11333340_11346098 NA coding upstream 91420 11333253 ~ 11346207 (+)
CI01000030_11316738_11317918 NA coding upstream 119668 11316495 ~ 11317959 (+)
CI01000030_11289568_11298414 NA coding upstream 139150 11287870 ~ 11298477 (+)
CI01000030_11464522_11490298 FBN2B coding downstream 20473 11464522 ~ 11490628 (+)
CI01000030_11550703_11555403 UHRF1 coding downstream 106654 11550703 ~ 11555596 (+)
CI01000030_11563241_11581907 KDM4B coding downstream 119192 11563241 ~ 11581907 (+)
G162975 NA non-coding upstream 3363 11434048 ~ 11434264 (+)
G162974 NA non-coding upstream 3601 11433795 ~ 11434026 (+)
G162964 NA non-coding upstream 14070 11411382 ~ 11423557 (+)
G162955 NA non-coding upstream 42044 11391639 ~ 11395583 (+)
G162954 NA non-coding upstream 46009 11391320 ~ 11391618 (+)
G162821 NA other upstream 569187 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 697076 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 935984 10471835 ~ 10511071 (+)
G162297 NA other upstream 1216403 10133299 ~ 10221224 (+)
G162951 NA other downstream 48552 11492601 ~ 11496119 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_020755 fbn2b coding NC_007133.7 CM002906.2 4524367 ~ 4649238 (-)