CI01000033_00039492_00046280


Basic Information

Item Value
gene id CI01000033_00039492_00046280
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 39160 ~ 46906 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000033_00039492_00046280.mRNA
ATTTAAAACCAGATTTGTGTCCTCAGGATCAAAGCTTACTGAGCCTGCGGTCTCAAAGAGAGAGAGAGTGGGGGAGAGAGGAAAAGAGAGAAAGAAGAGAGCACTAATAATTACATTGCTCTAGGAGTACTCTCTTGGCAAACAGAGAACTTGCACTGTGGAGTTATGAGGAGTTATAGATACTGGCATCCAGCGGGATAATTGTGGACCTCTTGAACTATACTCGCAACTCTATATTAATTAATAAAGTGTTCATAATCTGAGCTCGCTGCGTGTTTGAGTTACAAAACCCTTGATATTTTCCCAAACATGGTCTCACCGCAGCATGAATAATGGCCAAACTTTCCAAAAATGATCGACGGATAGCCATTCATAAACTTTGCTTCATCAGACTTTGCAGCAGTTTATTGGTGCCTGACGCGTTCAGACTGATTTATAGACTCCTCCTTATTAAGCGCTGGTTTTGGACGCACGGGAGCAACGCGCTCAGAGTCTCTCGCATTGCTGTCTGGAAACCAGGACTAAGGCGCAACATGTATCCAGCGCGGCGCTGGCGAACGCGTGCTGCGGACTCACAGACGTGTCGGAGCATCATGTCAAGACGCGCGTTAACTCTGAAGTGGGGCGCCGGATGGATTCTGATGTTTTCATTCATTAATAACACTTGGGCGCAAGTCCAGTTCGCTCCTAAGGGTATTTTACCTTTTGACAAGGTGTTCTGCTCTGTCCGCGGGGTGCATTTCTCATCTATTAGCTGCTGTAAAAATGGCCCTGGCATCCGCAGGCAGATGGCTGATATACAGCCCAGTGATCCATCCTGTTTGACAGATCTTAAAGTACTGGCACTGCTCCACTTGAAGCTGCCAGACTTTGCAGCCCCGAACGACCAAATGGGTACCTGTCACAGAGGGTGGCTGAATATGTTTCTCGTGCTGCGTTTAATAGCGATCGGGGCTCTAATTCCACCGGGATACCTGATAGAGTCCGCAAAAAGAGATGGCTCCAACAGTGTGGCACTTATTTTGCGCTCATTGAAAAGCAGAAACCCTCTTCGAGAGGCTGACCACCTTTGGAGTGTGCTACCATTAAACCAGTGCAAAAATGCTTTTCGAACTCTTGAAGAAAAGCATCAATATGCCCCAGAATATTTTTTAGTGTCTATGGGCCATAATGAGCATGGAAGACCGCAGCTCCCTAGATGCCCTGTCATAATTATGCGCCCGTGCACCAGTTGCTTCATATTTATCTGTACGCGCTGTGACACTTATTTAATTAAACGTCTTGGAAGCAAGGTCCCGGCATGGCAGCAGATGTCTCGTGAATTTTTGACAAAATGCACAGCGTTTTCTGCGAGCCCTAGCTGCGACAGCCCCAGCACATGGCCCCCAGTCCCAGAGGAGATCCGACTGTTTGCTATCTGTTCACTGCGAGCACGCGAAAGAACTTGTTTCATTATTCTGCTGCAAATTAATGTCTTTTCATATTACACCGCTGAATACGGCATTGTTATCAGGCCGGGCTTGATTCTGTCTCAGTCGTCAGTTGGCGGAAGCTGGCTCCAATCAGTAAGGAAGCAGTTTCTGCCAACGACCAGCTGCTGGAAGCTGCTCACTTGATGATGATAATGAGAATCCTTCAGTTTTGTAATTGGCTGCTCTCTTAATATGCAGTGTTCAGTTTTACTACAACATTATTTATGTAGAGAGCATATATATATATGTTTGTTCTCAATTGCTCCAACCAAGTGCTTTAACTCAGCTTCAGCACGTATCACATTCAATCAGATACTAGCACAGCACTTTAAAGTTGATGCTGGTTGTGTAGGTTGACGCTGTGTAGTGTTTATACAATAGTCAGTGTATCTATGAAATACAAGGATTGGTCTTCTGGAGCTGACAGTGAGTCAACAATGATACAATTTCTGTGGGGTTTTTTTTTCATCCTTTTGCAAGACCATTGTTGCATATTGTGTTTTGAACGCTGGTCTCCATTTGGGATATTGATATCAAGATGTCTTTGGTCAAAAGCCTTGGTTTAGAAGCTAGACCTGCACCAAACTGGCATAGAAATCATGCTGGTCTAAACTAGTCTTGCCTGGAGGGTTATTTGGAGAGTCTTGTATCTGACCATTGAAATAGGTATACGATTAGTGACTGGTGAAATTAGTAAAATGAGATACCGTACAAGACCCCAGAAAATGAATTGCTAAATGCTGTAGAAAATACACCAACATTTCAAAAGA

Function

NR:

description
PREDICTED: protein sidekick-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000033_00039492_00046280.mRNA True 2242 mRNA 0.45 8 39160 46906

Neighbor

gene id symbol gene type direction distance location
CI01000033_00000373_00008090 NA coding upstream 30997 373 ~ 8163 (+)
CI01000033_00131331_00201065 SDK2, SDK2B coding downstream 84425 131331 ~ 201319 (+)
CI01000033_00227674_00228681 CDC42EP4A coding downstream 180768 227674 ~ 229350 (+)
CI01000033_00263817_00267075 PMP22A coding downstream 216860 263766 ~ 267428 (+)
CI01000033_00425156_00470606 DNM2A, DNM2 coding downstream 378250 425156 ~ 470676 (+)
CI01000033_00497624_00498442 NA coding downstream 450718 497624 ~ 498479 (+)
G167766 NA non-coding downstream 170291 217197 ~ 278323 (+)
G167741 NA non-coding downstream 196397 243303 ~ 298391 (+)
G167815 NA non-coding downstream 202288 249194 ~ 249508 (+)
G167749 NA non-coding downstream 251591 298497 ~ 299111 (+)
G167837 NA non-coding downstream 273226 320132 ~ 320515 (+)

Expression


Co-expression Network