G171164


Basic Information

Item Value
gene id G171164
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 74251 ~ 367683 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU194450
GGGATATATTAGGCAGCAAGTGAACATTTTGTCCTGAAAGTTGATGCATTAGAAGCAGGAAAAATGGGCAAGCGTAAGGATTTGAGTGAGTTTGACAAGGGCCAAATTGTGATATTGACGACTGGGTCAGAGCATCTCCAAAACTGCAGCTCTTGTGGGGTGTTCCCGGTCTGCAGTGGTCAGTGTCTATCAAAAGTGGTCCAAGGAAGGAACAGTGGTGAACCGGCGACAGGGTCATGGGCGGCCAAGGCTCATTGATGCACGTGAGGAGCGAAGGCTGGCCCGTGTGTCCGATCCAACAGACGAGCTACTGTAGCTCAAATTGCTCAAGAAGTTAATGCTGGTTCTGATAGAAAGGTGTCAGAATACACAGTGCATCGCAGTTTGTTGCGTATGGGGCTGCATAGCCACAGACCAGTCAGGGTGCCCATGCTGACCCCTGTCCTCTGCTGAAAGCACCGACAGTGGGCACGTGAGCATCAGAACTGGACCACAGAGCAATGGAAGAAGGTGGCCTGGTCTGATGAATCACTTTTTCTTTTACATCACATGGATGGTCGGGTGCGTGTGCGTCGCTTACCTGGGGAACACATGGCACCAGGATGCACTATGGGAAGAAGGCAAGCCGGCGGAGACAGTGTGATGCTTTGGGCAATGTTCTGCTGGGAAACCTTGGGTCCTGCCATCCATGTGGATGTTACTTTGACACGTACCACCTACCTAAGCATTGCTGCAGACCATGTACACCCTTTCATGGAAACGGTATTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194450 True 770 lncRNA 0.51 2 74251 367683

Neighbor

gene id symbol gene type direction distance location
CI01000034_00051315_00059354 TOM1 coding downstream 14897 50716 ~ 59354 (-)
CI01000034_00368808_00390623 NA coding upstream 803 368486 ~ 391307 (-)
CI01000034_00558341_00561924 C1QTNF6A, C1QTNF6 coding upstream 190560 558243 ~ 561995 (-)
CI01000034_00571856_00577732 NA coding upstream 204173 571856 ~ 577775 (-)
CI01000034_00599073_00603301 UBE2I, GM14176, UBE2IA, GM5931, UBE2IB coding upstream 231390 599073 ~ 603301 (-)
CI01000034_00604811_00614185 MPST coding upstream 237083 604766 ~ 614674 (-)
G171136 NA non-coding downstream 30152 43738 ~ 44099 (-)
G171131 NA non-coding downstream 31003 23190 ~ 43248 (-)
G171146 NA non-coding downstream 61366 11750 ~ 12885 (-)
G171339 NA non-coding upstream 30031 397714 ~ 399839 (-)
G171340 NA non-coding upstream 44510 412193 ~ 412427 (-)
G171341 NA non-coding upstream 44989 412672 ~ 413037 (-)
G171309 NA non-coding upstream 73604 441287 ~ 442256 (-)
G171356 NA non-coding upstream 97729 465412 ~ 468708 (-)
CI01000034_01062505_01083413 NA other upstream 703930 1062444 ~ 1083413 (-)
CI01000034_01312431_01312780 PRR15LA other upstream 943846 1311529 ~ 1312780 (-)
G171755 NA other upstream 1496435 1864118 ~ 1866373 (-)
G171835 NA other upstream 2074138 2441821 ~ 2446293 (-)

Expression


Co-expression Network