G169394


Basic Information

Item Value
gene id G169394
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1150297 ~ 1193560 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192449
TTGTTATCAGAGAGATGGAGAGAGTTTGGAGAGAAGGTTTGGGGGCAGTGGAGAGAAAGATCAATGAAAGGAAGATTAAGATAGACAAGGAATACTGGACCATGGAGAGTGTGTTGTTTTCTTTTCTATTATATCTACATATTGCCGGCATTAGGTTTTGCCCTGTTAAAGGTCTCTTGATCTATACAATAGCAGAAACACTCACTTTTGTATAAAAAGGAAAATAAATAGCATGATGATGGGAGATTAGTGTGTGTGTGTAGGTGATGTATTCAGGAGGGGGGTGTACAAGCGTGTGTGTGAAGTCCAAAGTATACTTCGGCCGTCCGCGCTCCGCATCGGTCCGCGCACTGCCCGTGTGACGTAATTTTCGTCATCAGGAGGGTCTGCGGACGACCGTGCGCTGTCCACACACAGCCCAATTTTTGTGACTGGTGCATGTGCGAGTGATTTGAGCGCTTCAAAGCAAAGTCCACTAGATGTGGGATTGAACGCACCTTTCTGCGCTCACGGCCAAAGGAGTTTACTTTCAAAGGCTCGCTCACTCAACTGTGCACGAGCGGAGCAGAACACAGAAAATGAAGTATACTCGGGCCTTAAGTGAGTGTGTATGTGTGTCTGTGCTTCAGGGGTGTATTAGGCTGAGGTCGAGGTCAAGGGGTCATGAGGTATGAACAGGCCAAGAGTCCGTGTCACTTATTCACGAACCAGAGCAGCAAACTCTTCTGCTCCAATCTTTCCATCTCCATCTTTGTCCGCAGCCTGCAGGAATGCTTTGGTCTCCTTATCGGTCAGGTCTCTCCCATCTGTAGCAAAACCCTTCAGAACAAACTTAAGTTCCTCTTCTTCTATAAATCCGCTATTGTCAGCATCCAGGACATGGAAAGCCTTTTTCACATCGTCAGCCGACTTCGCCTTCAGTCCGACCATCTCAAAAAACCTCTTGTGGTCGAATGAGTCGACAGCTTTAAATGCATCCAGTGCTTTTTTAATGTCATCAGGGTTGAGGATGCTGTTCATCGCCATTTCTACAACTGCTGTAGAGTGAGCTGGAGTCCCGGGTTCAGCTGGAGGTTCAGGTCTGCAGAGGAACGAGACCGGCAACGCACAGACAGATAGCAAACCAAACTGGAGCTTGAGCACACCAAAAAGAGAGAGAGAGGGAGACAGACAGAGAGGGAAAAAGAGAGAGACAGAGCAGGACAGAGAGACAGAACACTGACTAGTTGGAGGTGAGATGAAGGGGAGAGAGAGAGTGTAAGAGGAAGATAAACGGACAGAGAAAGAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192449 True 1290 TUCP 0.48 5 1150297 1193560

Neighbor

gene id symbol gene type direction distance location
CI01000034_01139725_01146104 BAIAP2L2A coding upstream 3973 1139725 ~ 1146324 (+)
CI01000034_01124686_01125224 NA coding upstream 24100 1124686 ~ 1126197 (+)
CI01000034_00951238_00955839 NA coding upstream 194210 950467 ~ 956087 (+)
CI01000034_00943362_00945523 NA coding upstream 204666 943362 ~ 945631 (+)
CI01000034_00860887_00862727 NA coding upstream 287396 860887 ~ 862901 (+)
CI01000034_01210160_01223724 NA coding downstream 16600 1210160 ~ 1223869 (+)
CI01000034_01305634_01306636 NA coding downstream 112074 1305634 ~ 1306844 (+)
CI01000034_01383935_01395565 NA coding downstream 190031 1383591 ~ 1396448 (+)
CI01000034_01632580_01633233 NA coding downstream 438442 1632002 ~ 1633525 (+)
CI01000034_01637348_01637904 NA coding downstream 443051 1636611 ~ 1638009 (+)
G169391 NA non-coding upstream 17829 1127749 ~ 1132468 (+)
G169392 NA non-coding upstream 22653 1126456 ~ 1127644 (+)
G169357 NA non-coding upstream 31278 1053543 ~ 1119019 (+)
G169352 NA non-coding upstream 60024 1087419 ~ 1090273 (+)
G169417 NA non-coding downstream 39327 1232887 ~ 1233089 (+)
G169422 NA non-coding downstream 54587 1248147 ~ 1248372 (+)
G169435 NA non-coding downstream 100609 1294169 ~ 1302067 (+)
G169434 NA non-coding downstream 102031 1295591 ~ 1296004 (+)
G169456 NA non-coding downstream 159598 1353158 ~ 1353446 (+)
G169309 NA other upstream 180376 969261 ~ 969921 (+)
CI01000034_00643011_00645310 RBX1 other upstream 503887 642901 ~ 645310 (+)
G169340 NA other downstream 56659 1250219 ~ 1310878 (+)
CI01000034_01729413_01730790 EVE1 other downstream 532950 1729413 ~ 1731179 (+)
G169806 NA other downstream 1124413 2317973 ~ 2337690 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 2240576 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 2931540 4125100 ~ 4126825 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025326 pvalb6 coding NC_007114.7 CM002887.2 24297482 ~ 24434905 (+)