CI01000034_01729413_01730790 (EVE1)


Basic Information

Item Value
gene id CI01000034_01729413_01730790
gene name EVE1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1729413 ~ 1731179 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_01729413_01730790.mRNA
GGCCTGGTCTGGGACTGTTTTGAGGACTATGAGAAGTTTGTGAAAATCCATTTGGGGAATATCTGGATTGCGGACTTGGATATCAACGATAAAATGCTAGCAGAGGGCAGGGAGTCGCCAGTGTCTACTGTTGCTCATGCTGACAGTGATCAAGGAGAGGAAGAGTGCCCTCGTATTTCACTACTGAATGGGATAGACCAGAGTCGGCGGCACCGGACTGCTTTCACGAGGGAGCAGCTGACCCGTCTTGAGCAAGAATACTGCAAAGAAAGTTACGTGTCTCGACCCAGACGATGCGAACTGGCGGCAGCGCTCAACTTGCCCGAGACCACAATAAAGGTCTGGTTCCAGAACAGGAGGATGAAGGACAAGAGGCAGCGTCACAGTCTGCACTGGCCTAACGCACTGGACCCAAACCTGTGTGCCTTCATGGTGAGTCAGGCAGCTGCTGGACTCCACTACCCGCTGCTGCCCCGCTTACCTCTTCATCTATACTCTCATCTCGGCATGGGGAGCCTCTCCGGTCTCTCAAACCCCTACAGCGCCACCACAAGGCCAGTGGACACTTTGCATCTCCCTCCCTCGACCTACCCCTGGTTAGGTGGATTTCCACAGCCGGCTCTCTATTCCCCTGTCCAGACAATGCACCATCCCGCAGGATGCCACTGTCCACATTGCCTACAATGGAGACCGGACCACCTGCTTAAACCTAGAGGGGGAGCTAGGACAGGCACACAGCCCAAAACCTTCGGCAGTGCTTCGGGATAATAGGATAATGGTGCATTTACCATGATAAAAGGAGTTGTTCACCCAAAAAAATGAAAATTCTCTCATTGTTTACTCATGCGCATGTTGATCTAAACCTGCATGACATTTTTTCTAATGTGGGATACATTTTGAAGATTTTTTTGCCCATACAATGAAAGTTTAAGGCTGTTTTGTATTTATGCATCTGTACAGTTATTCAGAATCTAGATAATGTCACTCATGAAGAACTATTTTGTTGTTTAGAAATCTTACTGTAATATAGATAACGGTTTTGTTTACTTTCTTAAAAATACTTGATCTTTACAACATTTTTTCATCTATTGACATTTTTGCACCTGAACACTTTGTACATATATGCTTTCCAAAAATATATATGACAATATTGACTA

Function

symbol description
eve1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within dorsal/ventral pattern formation; post-anal tail morphogenesis; and regulation of mesodermal cell fate specification. Predicted to be active in nucleus. Is expressed in several structures, including blastoderm; germ ring; mesoderm; pharyngeal arch 3-7; and presumptive mesoderm.

GO:

id name namespace
GO:0007389 pattern specification process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_01729413_01730790.mRNA False 1157 mRNA 0.46 3 1729413 1731179

Neighbor

gene id symbol gene type direction distance location
CI01000034_01657515_01658817 NA coding upstream 70307 1657210 ~ 1659106 (+)
CI01000034_01637348_01637904 NA coding upstream 91404 1636611 ~ 1638009 (+)
CI01000034_01632580_01633233 NA coding upstream 95888 1632002 ~ 1633525 (+)
CI01000034_01383935_01395565 NA coding upstream 332965 1383591 ~ 1396448 (+)
CI01000034_01305634_01306636 NA coding upstream 422569 1305634 ~ 1306844 (+)
CI01000034_01764505_01767882 ATP5G1, ATP5G3 coding downstream 33326 1764505 ~ 1767922 (+)
CI01000034_01769963_01776287 UBE2Z coding downstream 36796 1767975 ~ 1776720 (+)
CI01000034_01811735_01836960 IGF2BP1 coding downstream 80288 1811467 ~ 1836960 (+)
CI01000034_01858418_01860499 NA coding downstream 127239 1858418 ~ 1861085 (+)
CI01000034_01862099_01867869 NA coding downstream 130920 1862099 ~ 1867869 (+)
G169477 NA non-coding upstream 37343 1691030 ~ 1692070 (+)
G169482 NA non-coding upstream 51767 1676497 ~ 1677646 (+)
G169578 NA non-coding upstream 110038 1619099 ~ 1619375 (+)
G169577 NA non-coding upstream 111375 1617759 ~ 1618038 (+)
G169570 NA non-coding upstream 121579 1607527 ~ 1607834 (+)
G169611 NA non-coding downstream 96404 1827583 ~ 1830891 (+)
G169620 NA non-coding downstream 163301 1894480 ~ 1910064 (+)
G169606 NA non-coding downstream 219251 1950430 ~ 1952366 (+)
G169616 NA non-coding downstream 221316 1952495 ~ 1952784 (+)
G169340 NA other upstream 418535 1250219 ~ 1310878 (+)
G169394 NA other upstream 535853 1150297 ~ 1193560 (+)
G169357 NA other upstream 610394 1053543 ~ 1119019 (+)
G169309 NA other upstream 759492 969261 ~ 969921 (+)
CI01000034_00643011_00645310 RBX1 other upstream 1083003 642901 ~ 645310 (+)
G169806 NA other downstream 586794 2317973 ~ 2337690 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 1702957 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 2393921 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 2463459 4192311 ~ 4200636 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location