CI01000034_04192675_04200041


Basic Information

Item Value
gene id CI01000034_04192675_04200041
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4192311 ~ 4200636 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04192675_04200041.mRNA
GCCTATGGCAGGATAGCAGCTCTGCATATTTCCAGTTGTAATTTACAAGGTATCACAGTTGACAATGATGAGGATTTGATGAAAATAACAGCAGGTGTACCCCCCTTAGGACCCAAGCGCGGGCTCCTTTGGACCGTCCTGCTCCTCTTCCTCTGGTACTGCTACCGTGTAGGTTCTGACCCACCATCCCACTCCGGAATGCTGAAAAGCAGCTCCAGCCGGTCCTCATTCTCTCGGTCATCCAGCCGTTCACCGGTCGACCCCGGACACTCTGCCCCTAAAGCATCTGCAGCCATCACTATGGAGTCAGTGGAGGAAGAGGAGAGAACAGAGAGCTACTTGACACCAGTGTTGAGCCATGCTCCGTTCCCTACCGACGCTACAGCGGGAAGCAGGAAGTTGTATAGAGCACTACAGGAGTATGCCAAGCGCTACAGTTGGGCCGGCATGGGGCGAATTCACAAGGGCCTGCGCAATCAGGCCAGGCACAATGATCGCCCATCTATTCAGAAGCCTCATCTTTTCTACCTCCCAGATGTTCCCAGCATACCTTTCTTTCCCAGGGATGCTCATCGTCATGACATTGAGGTTTTGGAGGCCAGTTATCCCAAAATCCTTGCTGAGTTCCAGGCAGTATACCAGAGGGGGATTGATACAAAGCTAGGGTGGAGTTACCAAGGACCAAAGGGCCAGACAGTGTTCCCACTCTATACCGCTGGGGTGTGTGTGGCCAGTAACTGCCGTGCGTGTCCGTGCACATACCGAACCCTCCTCTCGCTCAGAACCTTCATCAGCAGTAACTCTCTGGGGTCTGCGGGCTTCTGGCTCCTGGGTCCAGGGGCCACACTGGGAGGGGCCTATGGCCCTACAAACACACGTCTGCGCTGCCATCTGGGTCTGCAGACGCCTGCTCAGTGTGAGCTGGTGGTGGGGGGAGCTGAAGATGGTCCCAGAGTTATCTTCAGTGTGGACCTGTGGCATCCTAATGTGGCTGCAGCGGAGAGACAGGCTCTAGACTACATCTTTGCCCCTGAGCAGTAATTCCCAGGATGCACTGGTCAAACTCACTTTATGTCATAGCAAAATGCAGAAAATGTTGTTTTAAAGTTTGCAAAACATCTTTTGGTTTAGTTGAAAGTTCATACTGAAGATATTTATGATTAACTACCACATATTTAATGTGTCTCTTTTGAAATGTTTTAGTCAAAGTAGTTTCCCAAGTGTATCATACAGAGCAACAACATATCGACTATGTTGAGCCCTGAGCACATAGATACTGTGATGACATGTGAACAATTTTCAAACTTCATATCTATATTTGACTTGTGCCTGTCTTGATAATCCCGCGCTCCTGTTCTATCATTTTTGTGCCTGATTACTCCTCCTGACCTCTCTGATGTATACTGTGATACATGGTTCTCCGTAAATACTGTACTGTACACGCAAATCACGGCTATGTTATAAATCTTGTTTTATTTCATCAGATGCCAATTTATTTTCAGACCTGTGAAGCACACCGAAGACAACATACTGTATATGACCGGACTACTTGCATGCGTCGTGAATTTTGATCGTGTTGCCAACAATGCACTTGATGACTGTCCTGCAAATCAAGTATGTATTCATCTGAGTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04192675_04200041.mRNA False 1636 mRNA 0.48 7 4192675 4200636

Neighbor

gene id symbol gene type direction distance location
CI01000034_04149395_04151573 NA coding upstream 40949 4148573 ~ 4151726 (+)
CI01000034_04125435_04125780 RPRML coding upstream 65850 4125100 ~ 4126825 (+)
CI01000034_03983251_03998632 RND2 coding upstream 193790 3983251 ~ 3998885 (+)
CI01000034_03946027_03949208 NA coding upstream 243019 3945591 ~ 3949656 (+)
CI01000034_03923671_03931871 NA coding upstream 260772 3922512 ~ 3931903 (+)
CI01000034_04204946_04208081 CABP5B, CABP5, CABP5A coding downstream 4310 4204946 ~ 4208307 (+)
CI01000034_04222777_04228601 GCAT coding downstream 21961 4222597 ~ 4228745 (+)
CI01000034_04229970_04238150 MCM5.S, MCM5, MCM5.L coding downstream 29334 4229970 ~ 4238467 (+)
CI01000034_04244137_04250139 FOXRED2 coding downstream 43501 4244137 ~ 4250593 (+)
CI01000034_04251494_04257594 ANKRD54 coding downstream 50858 4251494 ~ 4257857 (+)
G170520 NA non-coding upstream 2264 4190047 ~ 4190411 (+)
G170493 NA non-coding upstream 11368 4173648 ~ 4181307 (+)
G170491 NA non-coding upstream 30907 4158670 ~ 4161768 (+)
G170504 NA non-coding upstream 71757 4120645 ~ 4120918 (+)
G170488 NA non-coding upstream 95791 4096655 ~ 4096884 (+)
G170526 NA non-coding downstream 15576 4216212 ~ 4217729 (+)
G170527 NA non-coding downstream 17253 4217889 ~ 4218156 (+)
G170240 NA non-coding downstream 18117 4218753 ~ 4220603 (+)
G170528 NA non-coding downstream 20647 4221283 ~ 4221496 (+)
G170537 NA non-coding downstream 117964 4318600 ~ 4319988 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other upstream 740826 3432846 ~ 3438839 (+)
G169806 NA other upstream 1854985 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 2461498 1729413 ~ 1731179 (+)
G169340 NA other upstream 2881797 1250219 ~ 1310878 (+)
G170229 NA non-coding upstream 122227 4063892 ~ 4064150 (+)
CI01000034_04192675_04200041 NA other downstream 1851 4192311 ~ 4200636 (+)

Expression


Co-expression Network