CI01000035_00042693_00050440


Basic Information

Item Value
gene id CI01000035_00042693_00050440
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000035
NCBI id null
chromosome length 418187
location 42693 ~ 51016 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000035_00042693_00050440.mRNA
CAGCCTGGACCCGGTGGCCGCAAAACATCCAATGGAACTTCAGGGTCAATGGCTTCATCAGTTCCAGGGAGTAACTCTAACAGACCCACCCCGGGAAGAAACAGAAACTCTGTGAAGACTCCCTCACAGTCACCACCTGTGTTTGAGGGTGTGTACAACAACTCCAGGATGCTCCACTTTCTCACAGCCGTGGTGGGCTCCAGATGTGATGTTATGGTGAAGAACGGCAGTTTATATGAGGGGATCTTCAAGACATTAAGCTCACGTTGTGAACTGGCAGTGGATGCGGTGCACAAGGTGAAAAATGAGGAAGGAGATGGAGGCGGTGGTGGCGGCACACCTGTCCATCCCAGGAGAGAAGAGATCACAGACACCATGATCTTTGGCCCTAGTGACCTCGTCACTATGATCTGCAAAGATGTGGATCTCAACTACGCTATCCGAGACACTTTTACAGACTCTGCAATCGGCTCAACAAGAGTAAACGGTGACCACAAAGAGAAGGTCCTTCAAAGGTGGGATGGAGGCGATAGCAATGGAGAAAATTTTGACCTAGATGCAGATGCATCTAATGGCTGGGATGCCAGCGAGATGTTCCGCTTTAATGAGGAGACCTATGGAGTGAAGTCCACCTATGACTCCAGTCTCTCCATGTACACGTACGTTGATGTCCTGGTTCCTCTGGAGCGGGGCAGCTCTGAGGGCTTCAGGCAGCGAGAAGCTCGAGCCGCCCGATTGGCCAATGAGATTGAAGCTAGTTCACAGTATCGTCACCGGGTAGCCCTGGAGAATGATGAAGGACGAACCGAGGAAGACAAATACAGCGCTGTGGTCCGGGACAGGGACCGTGATGGAGGAGAACGAGAAAGAGGAAGGGATAGCCCTGGGTTCTCCAGTGCTGGGAGCAGGTTTGACACAGTTTCTTCTTACTTTCCCACACTGTTATCTTATGTAGTCTTTCTCCGTAGTATACTGATGATCATTGCTGTCTTTATTTTAGGGAGGGCAAGTACATTCCTCTACCCCAGAGAGCAAGGGAGCGAGAAATGGGAGTTTCTGGAAGGGGCGAAAGAGGAGCTGTATCCACCCTGCCTAATCGAACAAATAGACCTGGCCCCTCAAGCTCCTCCCCTAGACCCCTTCCCTCTGGTAGTGGTCAGCCCATTCCACCCACTGATAGGAGCAGCCCTCTGTCTGTCAGAGGAGGATTCTCTACACACCAATCACAGAGCAGCCCACCAACTCAGCCCCGCCCCTCAGAGCCAGGTCACTCTAGCCCCCCTTCCCCACACACACTCCCACATTCGCTTTCACACCCACAGTCTCTCTCAGACTCGGCTCGGCCTGTCAATGGAGGCCCATGTTCAAGGTGCTCTCTCGGGTCCTCACCACTCTGGAGGTCACGGCCCACCACCTGTGATGTTGCTTCATGCCCCGCCACCTCCCCCTCAGCAGGGTTCTGGCCCCCAGCATGGACCTCCCCCACCTCAACAGGGGCCCCACCAGCACTACACCTACATTGGACCACCTCAGGGTGAGTTTCCTGCACAAGAGTGTGCTTTGTGACATTGTAGATTTGCAATGACATCTACAATTCTGTTTTCCATTACAGAAATCAGCTAATTATACAAATTTGATGTTTAATGTAAGGCTGTGCGGACTACGATTTTTTTTTTTTTTTTTTAGTTGATTAATTTCTGTTTTTTTGTTTGTTTGTTTTTTCTCTCTCATCAGTGGCTCATCCTCCGCAGCAGATTCCATTCCACCCTCCTGGAAACTGACAGAGTGACTTTTGAAACTGAGTCTAAGCAGAGCGCCCCCATCTGATCCTCCTGTGGGATCGCACATATGTATATACCCTCCACCTGCTCCAAGAATGGAAAAAAAGATTTTGTTTTTATTCACCTCTGGCAAGACTGAATGTGCTTGTTTTATTTTTATTTTTTTTTTTCCTCTTTTTGCTGTTTTTAATTTGAGCGGACGGGGACACATAGTGTCTAAATCAGAAAGAGGAAACGAGTGAGTGTGCAAGACAAAAAAAAAAAGGAATGAGGGACATTTTTATAAAAATACAGTGACCTCTCCCTTTGTCCTCAACCCCCTTATTAAATAAGCAAATA
>TU196399
AGGCCCATGTTCAAGGTGCTCTCTCGGGTCCTCACCACTCTGGAGGTCACGGCCCACCACCTGTGATGTTGCTTCATGCCCCGCCACCTCCCCCTCAGCAGGGTTCTGGCCCCCAGCATGGACCTCCCCCACCTCAACAGGGGCCCCACCAGCACTACACCTACATTGGACCACCTCAGGTGGCTCATCCTCCGCAGCAGATTCCATTCCACCCTCCTGGAAACTGACAGAGTGACTTTTGAAACTGAGTCTAAGCAGAGCGCCCCCATCTGATCCTCCTGTGGGATCGCACATATGTATATACCCTCCACCTGCTCCAAGAATGGAAAAAAAGATTTTGTTTTTATTCACCTCTGGCAAGACTGAATGTGCTTGTTTTATTTTTATTTTTTTTTTTCCTCTTTTTGCTGTTTTTAATTTGAGCGGACGGGGACACATAGTGTCTAAATCAGAAAGAGGAAACGAGTGAGTGTGCAAGACAAAAAAAAAAAGGAATGAGGGACATTTTTATAAAAATACAGTGACCTCTCCCTTTGTCCTCAACCCCCTTATTAAATAAGCAAATAATAAATGGTTAAAAAAAGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000035_00042693_00050440.mRNA False 2120 mRNA 0.49 9 42693 50994
TU196399 True 588 lncRNA 0.47 2 50229 51016

Neighbor

gene id symbol gene type direction distance location
CI01000035_00026316_00035699 SH2B1 coding upstream 5172 26125 ~ 37521 (+)
CI01000035_00087960_00088431 NUPR1 coding downstream 36795 87747 ~ 88889 (+)
CI01000035_00110757_00131789 DOC2A coding downstream 59763 110757 ~ 131840 (+)
CI01000035_00204613_00209263 PHB coding downstream 153619 204613 ~ 209858 (+)
CI01000035_00230246_00237031 ZFP652, ZNF652 coding downstream 179252 230246 ~ 237667 (+)
CI01000035_00243038_00243955 PHOSPHO1 coding downstream 192044 243038 ~ 244928 (+)
G172885 NA non-coding upstream 19119 19050 ~ 23574 (+)
G172886 NA non-coding downstream 10169 61163 ~ 63279 (+)
G172956 NA non-coding downstream 126155 177149 ~ 177349 (+)
G172957 NA non-coding downstream 127066 178060 ~ 178378 (+)
G172958 NA non-coding downstream 127656 178650 ~ 178906 (+)
G172960 NA non-coding downstream 137473 188467 ~ 188735 (+)
G172890 NA other downstream 15412 66406 ~ 72622 (+)

Expression


Co-expression Network