CI01000035_00087960_00088431 (NUPR1)


Basic Information

Item Value
gene id CI01000035_00087960_00088431
gene name NUPR1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000035
NCBI id null
chromosome length 418187
location 87747 ~ 88889 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000035_00087960_00088431.mRNA
CTTTAAAAACGGGCGACTTACAGGCTTGTAAACAACCGAGGACAAGAAAGAAGACGTCTAGACAGCTCTATAACTGAACTTCGCATATTTTCTAGCTTTTCAGAGCTAAACTTCTGTTCGTCTTTATCCACTGTTGCTCTAGAAGTTCGAGTTTCGCTCTTCACTGTCAAAATGAGTAACCACGTTGACGTGAAAAACATTGAACCGACCACCTTTGAGGACCGCTACTTCGATGAATATGAATACTATAACTTAACAGACCGTTATACCGAGTGCACTAGTCGCAAAGGCAGGACGAAGAAGGAGGCGAGTTGCAACACGAACAGACAGAACCCCGGGGGACACGAGCGCAAAATAGTGGAGAAACTCCAGAACGCTGAGAAGAAATCCAAAGAGTGACCCAGAAGAGGTGCGTGTAAACATCTCTTTCCACATTAACTTTGAAAGGTAAAAAAAAAAAAAAATTGATGGAATAATCATTTGTCTTGTAGATTCTATCGGACGGCTATAACTGGCAACCGACCACAGGTGTCTCTGCGGGAAACGGGCGCTGGGCTGCAGAAGGAGTGACTTCATGAACCTCCGCCTCAGGATCAGATGAGCGGGAGGAGGCTGAGTGAAGCTCCCGGTCCAGTGACTCGTGAAGCGGAGAGTTTTGTCAGGCACACTGCTCTCGTGTAGTATGTGGTGGGCCCTGCAGAACGAGCACCTGTTCAGAGGAACCGATATGCTTGTGATGGTGAATTTTAAATTGTAGCTTTGACCAAGTGTTGACTTTGATCTGTTTGGTGTTTTTATTTTTTTTTAAAAAAGGTCTTAAAAGGTCTTTTA
>TU196397
TCCACAGGCGGGGAGCTGAAGGAAACGAAGGCGGAGCGAGGTCTTTAAAAACGGGCGACTTACAGGCTTGTAAACAACCGAGGACAAGAAAGAAGACGTCTAGACAGCTCTATAACTGAACTTCGCATATTTTCTAGCTTTTCAGAGCTAAACTTCTGTTCGTCTTTATCCACTGTTGCTCTAGAAGTTCGAGTTTCGCTCTTCACTGTCAAAATGAGTAACCACGTTGACGTGAAAAACATTGAACCGACCACCTTTGAGGACCGCTACTTCGATGAATATGAATACTATAACTTAACAGACCGTTATACCGAGTGCACTAGTCGCAAAGGCAGGACGAAGAAGGAGGCGAGTTGCAACACGAACAGACAGAACCCCGGGGGACACGAGCGCAAAATAGTGGAGAAACTCCAGAACGCTGAGAAGAAATCCAAAGAGTGACCCAGAAGAGATTCTATCGGACGGCTATAACTGGCAACCGACCACAGGTGTCTCTGCGGGAAACGGGCGCTGGGCTGCAGAAGGAGTGACTTCATGAACCTCCGCCTCAGGATCAGATGAGCGGGAGGAGGCTGAGTGAAGCTCCCGGTCCAGTGACTCGTGAAGCGGAGAGTTTTGTCAGGCACACTGCTCTCGTGTAGTATGTGGTGGGCCCTGCAGAACGAGCACCTGTTCAGAGGAACCGATATGCTTGTGATGGTGAATTTTAAATTGTAGCTTTGACCAAGTGTTGACTTTGATCTGTTTGGTGTTTTTATTTTTTTTTAAAAAAGGTCTTAAAAGGTCTTTTAATAAAGAGCACTTTTTTTCCATCAAA
>TU196396
AGGTCTTTAAAAACGGGCGACTTACAGGCTTGTAAACAACCGAGGACAAGAAAGAAGACGTCTAGACAGCTCTATAACTGAACTTCGCATATTTTCTAGCTTTTCAGAGCTAAACTTCTGTTCGTCTTTATCCACTGTTGCTCTAGAAGTTCGAGTTTCGCTCTTCACTGTCAAAATGAGTAACCACGTTGACGTGAAAAACATTGAACCGACCACCTTTGAGGACCGCTACTTCGATGAATATGAATACTATAACTTAACAGACCGTTATACCGAGTGCACTAGTCGCAAAGGCAGGACGAAGAAGGAGGCGAGTTGCAACACGAACAGACAGAACCCCGGGGGACACGAGCGCAAAATAGTGGAGAAACTCCAGAACGCTGAGAAGAAATCCAAAGAGTGACCCAGAAGAGATTCTATCGGACGGCTATAACTGGCAACCGACCACAGGTGTCTCTGCGGGAAACGGGCGCTGGGCTGCAGAAGGAGTGACTTCATGAACCTCCGCCTCAGGATCAGATGAGCGGGAGGAGGCTGAGTGAAGCTCCCGGTCCAGTGACTCGTGAAGCGGAGAGTTTTGTCAGGCACACTGCTCTCGTGTAGTATGTGGTGGGCCCTGCAGAACGAGCACCTGTTCAGAGGAACCGATATGCTTGTGATGGTGAATTTTAAATTGTAGCTTTGACCAAGTGTTGACTTTGATCTGTTTGGTGTTTTTATTTTTTTTTAAAAAAGGTCTTAAAAGGTCTTTTAATAAAGAGCACTTTTTTTCCATCAAA

Function

symbol description
nupr1 Enables DNA binding activity and transcription coactivator activity. Involved in several processes, including regulation of cellular catabolic process; regulation of generation of precursor metabolites and energy; and regulation of programmed cell death. Acts upstream of or within negative regulation of cell cycle. Located in intercellular bridge; nucleoplasm; and perinuclear region of cytoplasm. Part of protein-DNA complex.

GO:

id name namespace
GO:0071391 cellular response to estrogen stimulus biological_process

KEGG:

id description
K15626 NUPR1, COM1; nuclear protein, 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000035_00087960_00088431.mRNA False 831 mRNA 0.45 2 87789 88863
TU196397 False 817 TUCP 0.47 3 87747 88889
TU196396 True 779 TUCP 0.46 3 87785 88889

Neighbor

gene id symbol gene type direction distance location
CI01000035_00042693_00050440 NA coding upstream 36795 42693 ~ 51016 (+)
CI01000035_00026316_00035699 SH2B1 coding upstream 50268 26125 ~ 37521 (+)
CI01000035_00110757_00131789 DOC2A coding downstream 21894 110757 ~ 131840 (+)
CI01000035_00204613_00209263 PHB coding downstream 115750 204613 ~ 209858 (+)
CI01000035_00230246_00237031 ZFP652, ZNF652 coding downstream 141383 230246 ~ 237667 (+)
CI01000035_00243038_00243955 PHOSPHO1 coding downstream 154175 243038 ~ 244928 (+)
CI01000035_00246630_00247648 NATD1 coding downstream 157565 246428 ~ 247703 (+)
G172886 NA non-coding upstream 24510 61163 ~ 63279 (+)
G172885 NA non-coding upstream 64215 19050 ~ 23574 (+)
G172956 NA non-coding downstream 88286 177149 ~ 177349 (+)
G172957 NA non-coding downstream 89197 178060 ~ 178378 (+)
G172958 NA non-coding downstream 89787 178650 ~ 178906 (+)
G172960 NA non-coding downstream 99604 188467 ~ 188735 (+)
G172928 NA non-coding downstream 103852 192715 ~ 193937 (+)
G172890 NA other upstream 15167 66406 ~ 72622 (+)

Expression


Co-expression Network