CI01000036_00999312_01007326 (GMPPAA, GMPPA, GMPAA)


Basic Information

Item Value
gene id CI01000036_00999312_01007326
gene name GMPPAA, GMPPA, GMPAA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 999312 ~ 1007363 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000036_00999312_01007326.mRNA
ATGCTGAAGGCTGTCATTCTTATCGGAGGTCCTCAAAAAGGGACCCGATTTCGCCCGCTGTCTTTTGAGGTGCCCAAACCTCTGTTTCCAGTGGCTGGAGTGCCAATGCTGCAGCATCACATTGAGGCCTGTTCTAAGCTTCCAAATATGAAGGAGATCTTAGTCGTTGGTTTTTATCAGCCCAATGAAGAACTTAACAGATTTTTGTCATGCGCCCAACAAGATTTCAAAATATCAATAAGATACCTTCAGGAATATGCTGCTCTGGGCACTGGAGGAGGAATCTACCATTTCAGAGATCAGATCCTGTCTGGCGGTCCAGAGGCATTTTTTGTCATGAATGCTGACGTGTGCTCAGAGTTTCCTCTGCCAGAGATGCTTGACTTCCAGAAGGAGCATGGAGATGCTTACAGTTTTATCATCCTTGGCACCACTGCCAACAGAAAACAGTCCCTGAACTACGGCTGCATTGTGGAGAATGAACAAACTGATGAGGTCTTGCATTATGTTGAGAAGCCCAGCACATTTGTGAGTGACATAATCAACTGTGGAATATACCTGTTCACTCCGGAGATATTCCAGCACATCGGAGAAGTTTTCCAGAAGAACCAACAGGACATGCTGTTAGAAGAGCAGTCCAATGGCTGGCATCGGGCCGAGGTGATCCGCCTGGAGCAGGACATCTTCACGGCTCTGGCAGGACAGGGCAAGCTATATGTGTACAAAACAGACCGCTTCTGGAGCCAGATCAAATCTGCAGGATCTGCGATCTATGCAAGCCGCTTGTATCTTAACCAGTATCACAAGACACATCCAGAGAGGTTAGCTACTAATACAGATGGAGGGCCGAAGACCAGAGGTCCAAATGTGTCCATAGGAACAGGAGTAACGATTGGCGCAGGAGTTCGCGTGAGGGAGTCCATCATCCTCCATGGTGCTACTTTACAGGATCACAGTTGCGTGTTGAACAGTATTGTGGGCTGGGGCAGCACCATTGGCAAATGGGCCAGAGTAGAAGGGACCCCTAGTGACCCGAATCCTAATGACCCGTATGCCAAAATTGACAGCGAGACACTCTTCAGAGATGGAAAACTAACACCCTCCATTACAATTCTAGGCTGTAATGTAAATATCCCATCTGAGGTCATCATACTCAACTCCATCGTCCTGCCACATAAAGACCTCAACAGAAGCTTCAAAAACCAGATCATACTGTAGTTTCAGTTTTACTTGTATTTATGGCATTAGCATAGAA

Function

symbol description
gmppaa Predicted to enable GTP binding activity and mannose-1-phosphate guanylyltransferase activity. Predicted to be involved in GDP-mannose biosynthetic process. Predicted to act upstream of or within biosynthetic process. Orthologous to human GMPPA (GDP-mannose pyrophosphorylase A).
gmppa Predicted to enable nucleotidyltransferase activity. Predicted to be involved in biosynthetic process. Located in extracellular exosome.

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K00966 GMPP; mannose-1-phosphate guanylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000036_00999312_01007326.mRNA True 1255 mRNA 0.47 11 999312 1007363

Neighbor

gene id symbol gene type direction distance location
CI01000036_00975332_00984107 DARS, SYDC, DARS.L coding upstream 14997 975332 ~ 984315 (+)
CI01000036_00947110_00948159 CXCR4B coding upstream 50646 947110 ~ 948666 (+)
CI01000036_00542557_00543309 NXPH2, NXPH2A coding upstream 455926 542557 ~ 543386 (+)
CI01000036_00457595_00467133 TTF2 coding upstream 532179 457595 ~ 467133 (+)
CI01000036_00322865_00441961 IGSF3 coding upstream 557351 322865 ~ 441961 (+)
CI01000036_01140528_01239535 ASIC4, ASIC4A coding downstream 133165 1140528 ~ 1239535 (+)
CI01000036_01274853_01288632 WNT6.S, WNT6B, WNT6 coding downstream 267490 1274853 ~ 1289612 (+)
CI01000036_01300508_01318859 WNT10A, WNT10A.L coding downstream 292916 1300279 ~ 1318896 (+)
CI01000036_01345899_01346471 NA coding downstream 338207 1345570 ~ 1346588 (+)
CI01000036_01388349_01389269 CDK5R2B coding downstream 379825 1387188 ~ 1389670 (+)
G173359 NA non-coding upstream 53531 945452 ~ 945781 (+)
G173323 NA non-coding upstream 151181 847888 ~ 848131 (+)
G173322 NA non-coding upstream 153966 845102 ~ 845346 (+)
G173245 NA non-coding upstream 278747 718953 ~ 720565 (+)
G173217 NA non-coding upstream 411323 581104 ~ 587989 (+)
G173249 NA non-coding downstream 3569 1010932 ~ 1011288 (+)
G173790 NA non-coding downstream 59861 1067224 ~ 1067681 (+)
G173811 NA non-coding downstream 124040 1131403 ~ 1131632 (+)
G173812 NA non-coding downstream 131328 1138691 ~ 1138920 (+)
G173807 NA non-coding downstream 151718 1159081 ~ 1163226 (+)
G173327 NA other upstream 135158 863295 ~ 864154 (+)
G173157 NA other upstream 418306 580062 ~ 581006 (+)
G173152 NA other upstream 521141 475352 ~ 478171 (+)
G174214 NA other downstream 738989 1746352 ~ 1747188 (+)
G174289 NA other downstream 977521 1984884 ~ 2006413 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00000913 gmppaa,LOC105902665,LOC107556449,LOC108266472 coding CM030137.1 CM030137.1 8646653 ~ 8652047 (+)