G173811


Basic Information

Item Value
gene id G173811
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 1131403 ~ 1131632 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU197412
GTTTTTTGAGCAGCAAATCAGCATATCAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGACATCACAGGAATAAATTACATTTTAAAATATATTCCAATAGAAAGAAGTTATTTAAAATTACAAGATTATGTAACAACATTACTGTATTTTACTGTATTTTTGATCAAATAACTGCTAAGCATAGGAGACCTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197412 True 230 lncRNA 0.30 1 1131403 1131632

Neighbor

gene id symbol gene type direction distance location
CI01000036_00999312_01007326 GMPPAA, GMPPA, GMPAA coding upstream 124040 999312 ~ 1007363 (+)
CI01000036_00975332_00984107 DARS, SYDC, DARS.L coding upstream 147088 975332 ~ 984315 (+)
CI01000036_00947110_00948159 CXCR4B coding upstream 182737 947110 ~ 948666 (+)
CI01000036_00542557_00543309 NXPH2, NXPH2A coding upstream 588017 542557 ~ 543386 (+)
CI01000036_00457595_00467133 TTF2 coding upstream 664270 457595 ~ 467133 (+)
CI01000036_01140528_01239535 ASIC4, ASIC4A coding downstream 8896 1140528 ~ 1239535 (+)
CI01000036_01274853_01288632 WNT6.S, WNT6B, WNT6 coding downstream 143221 1274853 ~ 1289612 (+)
CI01000036_01300508_01318859 WNT10A, WNT10A.L coding downstream 168647 1300279 ~ 1318896 (+)
CI01000036_01345899_01346471 NA coding downstream 213938 1345570 ~ 1346588 (+)
CI01000036_01388349_01389269 CDK5R2B coding downstream 255556 1387188 ~ 1389670 (+)
G173790 NA non-coding upstream 63722 1067224 ~ 1067681 (+)
G173249 NA non-coding upstream 120115 1010932 ~ 1011288 (+)
G173359 NA non-coding upstream 185622 945452 ~ 945781 (+)
G173323 NA non-coding upstream 283272 847888 ~ 848131 (+)
G173322 NA non-coding upstream 286057 845102 ~ 845346 (+)
G173812 NA non-coding downstream 7059 1138691 ~ 1138920 (+)
G173807 NA non-coding downstream 27449 1159081 ~ 1163226 (+)
G173803 NA non-coding downstream 114737 1246369 ~ 1247512 (+)
G173846 NA non-coding downstream 190756 1322388 ~ 1322864 (+)
G173865 NA non-coding downstream 282293 1413925 ~ 1414569 (+)
G173327 NA other upstream 267249 863295 ~ 864154 (+)
G173157 NA other upstream 550397 580062 ~ 581006 (+)
G173152 NA other upstream 653232 475352 ~ 478171 (+)
G174214 NA other downstream 614720 1746352 ~ 1747188 (+)
G174289 NA other downstream 853252 1984884 ~ 2006413 (+)

Expression


Co-expression Network