CI01000039_04070151_04075216


Basic Information

Item Value
gene id CI01000039_04070151_04075216
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 4070098 ~ 4075361 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_04070151_04075216.mRNA
ATGAAGATTGCAGCAGTTATTGTTTTTCTAGTCTGTCTGCTTGCTACAGATGTACAAGGGCAGAACCAGATTCACAAAGGCAGGTGCTTCTGTGCTGACAAAGGAGTGGATGTGGTTTTACGGAAGAACATTGAGAAGTTTGAAATCATCCCTCAAAGTCCTTCTTGTGGAAAACAAGAGATTATACAAGCACAGTTCATCAAGAACAAGAAGACGATGAAGACTATTGCAGCTTTTGTTCTTCTTGCCTGCCTGATCGCTGTAGGAGTGAAAGGGCAGGACAAGTCTTCGAAGGGCAGGTGCTTCTGTGCAGACAAAGGTGCAAACATGGTTTTAGTGAAGAACATTGAGAAGGTTGAAATCATCCCTCCAAGTCCATCTTGTCGCAAACATGAGATTATGTAAGCATAGCCTACATTTGTATACTTTAATTTATTTAAATATTCATCAATGCCTACTTTGACCACTCTCATATTCTCCATTTAATCGTCCTGGACACGGTCTGGGAGTCGGCAGCCCCACCAAATTTTTGTTTTGTCCCTGATATCAA

Function

NR:

description
chemokine

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_04070151_04075216.mRNA False 550 mRNA 0.42 4 4070151 4075361

Neighbor

gene id symbol gene type direction distance location
CI01000039_04065787_04066284 NA coding upstream 3520 4065669 ~ 4066653 (+)
CI01000039_04062068_04062375 NA coding upstream 7213 4062003 ~ 4062961 (+)
CI01000039_04058417_04059141 NA coding upstream 10648 4058343 ~ 4059526 (+)
CI01000039_04048342_04049635 NA coding upstream 20188 4048079 ~ 4049972 (+)
CI01000039_04017602_04018203 GRSF1 coding upstream 51683 4017602 ~ 4018468 (+)
CI01000039_04078795_04079273 NA coding downstream 3434 4078745 ~ 4079273 (+)
CI01000039_04108687_04120437 FLOT2A, FLT2, FLOT2B, FLOT2 coding downstream 33326 4108687 ~ 4120437 (+)
CI01000039_04198172_04200073 FAM222BA coding downstream 121885 4197246 ~ 4200160 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L coding downstream 148527 4223868 ~ 4224657 (+)
CI01000039_04244908_04247540 CENPV coding downstream 169143 4244504 ~ 4247540 (+)
G180111 NA non-coding upstream 94451 3975058 ~ 3975700 (+)
G180109 NA non-coding upstream 96006 3973909 ~ 3974145 (+)
G180108 NA non-coding upstream 98487 3971459 ~ 3971664 (+)
G180107 NA non-coding upstream 102145 3967683 ~ 3968006 (+)
G180155 NA non-coding downstream 13610 4088971 ~ 4089226 (+)
G180156 NA non-coding downstream 15741 4090998 ~ 4091608 (+)
G180157 NA non-coding downstream 17127 4092488 ~ 4092835 (+)
G180160 NA non-coding downstream 50187 4125548 ~ 4125931 (+)
G180185 NA non-coding downstream 53893 4129254 ~ 4129494 (+)
G179903 NA other upstream 644596 3424037 ~ 3425555 (+)
G179798 NA other upstream 937967 3129572 ~ 3132184 (+)
G179528 NA other upstream 1571532 2497674 ~ 2498619 (+)
G178423 NA other upstream 3084399 966676 ~ 982406 (+)
CI01000039_04829464_04847182 ZFR other downstream 768821 4829413 ~ 4848563 (+)
CI01000039_07324920_07329407 NA other downstream 3245323 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 3820515 7896773 ~ 7905162 (+)

Expression


Co-expression Network