XLOC_009198


Basic Information

Item Value
gene id XLOC_009198
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 22160925 ~ 22161978 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019152
CTGGAAAAGCAAGCAATAAGCTGGTGGAAAGTTGTCATGCTGTAGCTGTGATCAGACCTATTTCTGTCCTGGCTCTCTTCATCAAAAACAGACAGCTGCAATACCTGAAAGGACAACGCTTCAGTTACAGTGGCACTTCCTATTacagaaacactgatttaaataaGAAATACTGCCCTGTTATTGGAATAAACATCCTCTGATACAGTATGTCCATTAACGGAGCATCGTCCTGTAAGTgtcatcatttattattcatgCTGTAGCACTCCACATTTTAAATCACGTCCATTTGTAGATATAAGATCTTCTAGAATGATCTTAATAGACAACCACTGTGGCTGTATTGAAACTAAAAGTATCAAATGTATATTGCAGTCATATTTCTGACATTCGTCTCAGAAAATTTAATGGCCAAAATCGAGCATAATTATTTCCATATTTCGCATATCTCACTATACCATGAACACAAATAATGAAGTAAACctatattttaaaacagtaaataaatggcCCCTTATGGAAATCTGGCATGCTTTTTgcagaattttaaaatatatgaagagttcagatgcaaaagcctctaaccCGGGTAGCAAAgagttctggcccagatttgCCATAAAGCTaacacagcaggcattcatcctgctctggcatacagcatgtgggccaagcatgGCCCAGGTTTGTTAATggtggcaccatctttaaagTGCCACGCAAAACATGTCAAATGTAgaatttggcccagatgttaaaaattgatatgtgggccacttaattttggcctatcttgacagacttttaaaatgcatttaaattattttttaagtaaattattattattttcttaaataaagaaatattttgatgAACAAACTCGTTTCCAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019152 True 893 lncRNA 0.36 2 22160925 22161978

Neighbor

gene id symbol gene type direction distance location
XLOC_009197 scn3b coding downstream 13065 22133839 ~ 22147860 (-)
XLOC_009196 drd2a coding downstream 86610 22046557 ~ 22074315 (-)
XLOC_009195 NA coding downstream 256699 21900306 ~ 21904226 (-)
XLOC_009194 zgc:162608 coding downstream 282929 21875545 ~ 21877996 (-)
XLOC_009193 laynb coding downstream 307934 21842638 ~ 21852991 (-)
XLOC_009199 si:ch211-286b4.4 coding upstream 2571 22164549 ~ 22251089 (-)
XLOC_009200 CR936967.1 coding upstream 98903 22260881 ~ 22260997 (-)
XLOC_009201 zgc:194114 coding upstream 140746 22302724 ~ 22304193 (-)
XLOC_009202 NA coding upstream 426526 22588504 ~ 22594885 (-)
XLOC_009203 CR388121.1 coding upstream 558787 22720765 ~ 22720881 (-)
XLOC_009187 BX663519.1 non-coding downstream 620649 21521803 ~ 21540276 (-)
XLOC_009186 NA non-coding downstream 653389 21493852 ~ 21507536 (-)
XLOC_009185 NA non-coding downstream 791364 21355581 ~ 21369561 (-)
XLOC_009180 CR626907.2 non-coding downstream 1051317 21079826 ~ 21109608 (-)
XLOC_009204 BX572079.1 non-coding upstream 793039 22955017 ~ 22955132 (-)
XLOC_009205 NA non-coding upstream 982976 23144954 ~ 23154260 (-)

Expression


Co-expression Network