CI01000040_05129482_05130724 (ADRB2B)


Basic Information

Item Value
gene id CI01000040_05129482_05130724
gene name ADRB2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 5128744 ~ 5130724 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_05129482_05130724.mRNA
GTCAAAGCTCATGGAGGGAGAGGATACGTTGAGCACGGAGAACACCTCCCTGCCCATGAATGTTTCAGCCGGGCTGAACGATTCTTCTCCGGTGTCTTCACCTGGCTCAGACTATAGTGATGTAGAGGTGGTGATAATTAGCATCTTAATGGGGCTTCTGGTTCTAGGCATCGTTTTTGGCAATGTGCTGGTCATCAGCGCCATTGTACGATTCCAGCGTTTGCAGACGGTCACCAACTACTTCATCAGCTCCCTTGCCTGCGCCGATCTGGTCATGGGCCTCATGGTGGTGCCATTCGGAGCCTGCTACATCCTTCTCAACACGTGGCACTTCGGAAACTTCTTCTGCGAGTTTTGGACAGCTACGGATGTGTTATGCGTGACCGCTAGCATCGAGACGTTGTGCGTGATCGCCCTGGACCGGTACGTTGCGATCATGTGGCCTCTACGCTATCAGTCGATGCTTACGAAGCGGAAGGCCTGCGGGGTGGTCCTAGGGGTGTGGGCGGTGGCTGCCCTTATCTCTTTCCTGCCCATTCACATGGAGTGGTGGGTGTCAGATGAACCTGACGCAGTGCGCTGCTTGGAGAACCCCACCTGCTGCGACTTCAACACGAACGCCGCCTACGCCGTGACCTCCTCCATCATCTCCTTCTACATCCCGCTGGTCATCATGGTATTTGTGTATAGCCGGGTCTTCCAGGAGGCCCGTAGACAGCTTCAGAAAATTGATCGCATTGAGGGGCGCATACGCACACAGAGCTTCAGCACCCAGGAGGGGAATGAGGTGAAGAACCGGAGGACCAAGTTCTGCATGAAGGACCACAAAGCTCTGAAGACCTTGGGGATCATCATGGGAACCTTCACCCTCTGCTGGCTGCCGTTTTTCGTGCTTAACGTAGTGGCGGCCATCTGGAAGATGGACAACATCATGTTGCCTTTCAGGATCTTGAACTGGATCGGCTACGCCAACTCCGCCTTCAACCCCCTGATCTACTGCAGGAGTCCTGAGTTTAGAAACGCCTTTCAGGAGATCCTGTGCTGGAGAACTTCTCGTCTACCCTCCACAAGGAATAACAAGGGATATATCTACAGCGGCCACAGCTGGCAAGTCCACAAGAAGACCACCAGACAACGAGAGCCCTCACCAGCTTGCGAAACAGAAATGGGTGTCGACTGCTTGACTGCAGGCACCAAAAACACAAATGGGAATTGTAATAAAGCTGTGATGCCCAACATTTAGCCAGTTTTGAACATTTGGATATTCTCTTCATATTCCCTGGAGCACTGGAGATATTTCTGGTTGCAGCCACTTTTGTCTGTGACAAAACATGGTTTTTAGATGTTTTAGCCTTTTGAAACAAGAAGGTCTATTGTCATATTGTGATACTTGTATTGAGTCAGAACAAATGGAAATTAAGTAACTTCTGTTTTTGGACAAATGAGGAAAGAGAGAGGGTTTGAAAGCCAAGACAATCTACCTCTGGATTCCATTTACTACCTCGAGACACTTTTCACGTCTCAACTGAAACCTGCATGGATAGTTAATTCATAATTTATTCAGAAATGCCTCAACTTACAAACCGAGAGTCTAGATTTGTAGTGGATTGCAGATCTTAAAGAGCATCAGAGGGGTGTCTTATAGCAGACAGACTTGTTACATTCCGTTAAGAGCTTGGGCTTCTCCAGTCAGAGGAAATATAACCCTCTGATGAGGGCCAACAGGTGCACATTGCCGTCTGTGCTATAACCAGCTGTTCTTGTCGAAAGGAAAAAGTGAAGGAGCCAAGCAGTTCTCTCCAGCCCAAGCACTTCAACCTTCCCCCATTAACATTTCCACTGGGAAATCATTTTAAGGTTACAGCTGAAGCTGTATCTATAAAGGGTCATGTTTATAAAAGTAAGTACGCAAGTCTACATTTGTAGGCTGGGTGGCACAATATTGATGATATATTTAACATGTCACTATACGTCTAATAAA

Function

symbol description
adrb2b Predicted to enable beta2-adrenergic receptor activity and norepinephrine binding activity. Acts upstream of or within regulation of heart rate. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including digestive system; eye; heart; kidney; and musculature system. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); disease of metabolism (multiple); kidney failure (multiple); lung disease (multiple); and open-angle glaucoma (multiple). Orthologous to human ADRB2 (adrenoceptor beta 2).

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04142 ADRB2; adrenergic receptor beta-2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_05129482_05130724.mRNA True 1981 mRNA 0.48 1 5128744 5130724

Neighbor

gene id symbol gene type direction distance location
CI01000040_05017494_05031260 NA coding downstream 97484 5017335 ~ 5031260 (-)
CI01000040_05001071_05001574 NA coding downstream 127073 5000967 ~ 5001671 (-)
CI01000040_04971645_04995685 KIF20A coding downstream 132376 4971548 ~ 4996368 (-)
CI01000040_04945055_04949602 NA coding downstream 179142 4944973 ~ 4949602 (-)
CI01000040_04668020_04835636 DACHA, DACH2 coding downstream 293108 4668020 ~ 4835636 (-)
CI01000040_05246227_05249185 NA coding upstream 114741 5245465 ~ 5249185 (-)
CI01000040_05254119_05259873 UBLCP1 coding upstream 123342 5254066 ~ 5260482 (-)
CI01000040_05290906_05309503 NA coding upstream 158644 5289368 ~ 5309503 (-)
CI01000040_05422744_05511374 SGCD coding upstream 291881 5422605 ~ 5511374 (-)
CI01000040_05761106_05766999 NA coding upstream 629233 5759957 ~ 5766999 (-)
G187290 NA non-coding downstream 25548 5102958 ~ 5103196 (-)
G187289 NA non-coding downstream 27846 5100638 ~ 5100898 (-)
G187288 NA non-coding downstream 28439 5099292 ~ 5100305 (-)
G187286 NA non-coding downstream 34735 5093792 ~ 5094009 (-)
G187269 NA non-coding downstream 58314 5070214 ~ 5070430 (-)
G187297 NA non-coding upstream 7594 5138318 ~ 5138655 (-)
G187171 NA non-coding upstream 49616 5180340 ~ 5187314 (-)
G187169 NA non-coding upstream 94168 5224892 ~ 5226093 (-)
G187168 NA non-coding upstream 101682 5232406 ~ 5237140 (-)
G187330 NA non-coding upstream 109315 5240039 ~ 5240388 (-)
G185681 NA other downstream 1783864 3344475 ~ 3344880 (-)
G185593 NA other downstream 2136061 2992188 ~ 2992683 (-)
CI01000040_02595281_02596387 FGF1B other downstream 2532320 2594895 ~ 2596728 (-)
G183972 NA other downstream 4295203 833140 ~ 833541 (-)
G187207 NA other upstream 133469 5264193 ~ 5286918 (-)
G187348 NA other upstream 431931 5562655 ~ 5565553 (-)
G188009 NA other upstream 1210803 6341527 ~ 6342701 (-)
CI01000040_06423141_06425495 RBMX2 other upstream 1292129 6422853 ~ 6425495 (-)
G188226 NA other upstream 1572477 6703201 ~ 6783675 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019752 adrb2b coding NC_007132.7 CM002905.2 35078766 ~ 35082715 (-)
rainbow trout (Oncorhynchus mykiss) G1236457 LOC106604332 non-coding NC_048578.1 CM023232.3 30466479 ~ 30469933 (-)
bowfin (Amia calva) AMCG00011183 NA coding CM030133.1 CM030133.1 13186948 ~ 13192140 (-)