G187348


Basic Information

Item Value
gene id G187348
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 5562655 ~ 5565553 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU212763
GCAGATTTGCATAATATTCTGAGTTTGCATTTCATGGTTTTTATTCATTTTAAGGAATACTAAATCTGTTTTTGTGCAAGTGAGATGAGTAAATGTATGCTCATATTTAGACTAGAACTACATTATCCATCACACAGAGCACACAACGCCTCGGCACTTACGATTTCTCTCAACATGTGGACAGGAGAGCTGTCAATTAATGGGAAATCAAAGTAACTTGTGTTACTTATCTGAAAAAGTAAATATTTTGTAAATGTAAAAGTAATTTACTTTACTACTTGAAAAAGTAATCTGACTTCATACTTTGCATTATGCTGGGTACACACCACAAGATAATCGGGCTGATTTTGGGCCAATTTCTACCCTTCTGACAATCCTAGGTAATGTCCCGATTAGCTTGATGGTTCCACAGATTATCTTATCAGATTTTCCTGTGGTGTGAGGTGTGTTAAGAGTGACTAAATCTTCTCAGAAGAACGTCAGAGCCACCCCGATCACGAATCGTAAATATCCAACGTTGATTCAGAAATCCTGATATGTGTGGGGAACCCCAAGGACAAACGCGCACATGCTCTGGAGATTATCACGTGAAACGAAACAATATCCAATCAGAAAGCGAGCTGACAGAAGACGGAAACACAGTCATGGTGCAGCACAAAATAAAGATCATGTTCCCGCCGTCTCCACGACTTCACCCAAACCCTTTTCTCTTTTTTTTCCAGTGAATTTTCTCTCAAAATCATTCCAAACACTATCATTGCAATTTCTTCCTGCTATCGTCCGCCATGTTTATTCTGAAGTTTTGAGAGATTTTGCGAGATTTCCCGTGTTCACGGTCAGGACACTGGTTGAAAATCTGTTCATGCTGTCTTTGTCACATCACAACACACCACACACTATAGGAGCAAAACGGTTAAATCTAGGATTTTTTTGTCCTCATGTTTGTGGTCTCTCACATTTTGAAAATCTTATAAGATTTAAAAAATCTTTTAGTGTGTACCCAGCATTACTAATATGTTACCCCCGAACACTGTTAACAAAAAGAGAAACGTTATAAAATGCCAATCTTTACTTTTAAAAAATTGATAATCTAAACAAAAAAAAAAACTATTTTAGCATTTATTACATGATTTCTATCAGTTTTAAATTTCAGCTGTCCCACATTTGTGCCATTATTTCCAACTCAACCAACAATTTAATAAATTGTACTTGTTTATCAAGGAGTCAGAAGTGTTAGTATGAACGGTGGGTATTATTACCTGGTAAATTGTATCAAATTATGCAAAAAGTGGGAGAATATTATTTAACTGTGTATTTAGAATACATAAAATGGAACATTGACTGTAAAATACAAAAATTCTACTTTTAAAATATTTGAAACATCCTTTCTGCCACTATCATTTCCACCACATAATTATGTTAAACTGTGAAAAATGTGTTTTAAAAGAGTTTATTATTTTATCCTCAGGGCCACACAAACCCATAGTTAAAGAAGCACCCAGAATGCCCTGTTGCTCTACATTGTGTCTCTTCTGAAACAATCAGCAGTATAAGATTGGATTGCAACAACTTGTGCTTGCCACCCAAAATAAACACAAAATGAATAGTGTAAAATCAAGTCTATTACAGTAGCTTTCAGAAAATCTTCACATTAGATCAGTATTTGGTTTTGTTGAGATGAATTGGATCATGTTGACAAGCCCTCACCCAGCAGGGCACTCTCTCCCCATTCATAACCGCCGTGCGACACTGATTGCATGACACGAGACTCTGCTGGAAAGCAAGAACTAATTATCCAAAGAAGAAAAACATTTTCTCTGTATTCAGAAAGCTTCTGTCAGCGGTGTGTCACAAAGCCGCGTTAGATGTCAGTTTACTCTCTTGCGTCTCTCAGGGATGTGTAAATTTCATAACTGAAACAGTGTCACCTTTTCCATGCTGGTCTCTGGCTTGGCTTTTAATTTGGTCCGTAGGAAAGGTCTTACTACGATCTGGTGCGAATGATGTTTGTCTTTTGTTTTCATCCGCTATGACTTTTGACATTTTCACATTTAATGGACATCAAAACAAGGATGTTTGCGTGCCTTTCGTGCCCCAACATCGCAAAACAAAGGCTTTGGGGGATCTCTCAAAAGTTTGCGAACACATGCAGGCGAGGAAATGTCACTCCCCTTACACGCGGATCAAAGATGAGAGGACGATGACACATGAAGGCATAATAATAAAGGCGAGATCGAGTGAGAAGAATACCTGCACCCTATTCATGCACCTCGACATCCTGGCCTTCTATCCCACAATCCATCACTGTGTCACTGGCTGGGCCACCCAGTACAGTGACAAATCTGCCTGTCAGGAGTACAGGGTCTGCCTTGACAGGCTGGCATTTTAACTACAAAGATTAATTTTGAAACTTACCAGCTCTTTCTCCAGACAACATCTCTATGATTAATACAGCAAGAAAAAGCTCATGACCCTATCAGAGTGCAAAGACTAGATGTTGGGAAACATCAATAAAAAGAGAAACTGGCATAAGATGCACTGGAAGTATGTTGTTTGCAGACACAATAAGTTCAGCTGTCAATCCAGTTTGAAGATAAACTTTGTTGTCTTTCATTGTCCTTGAGATTGTAAGAATTGCTTTAAACCCATCAACATCTGACCTATCTGAAAATTTAAAGCACTGCCCATTTGTCCTACTGTTTGTCATTTGTTTCTTTGTTCTTATTTTATTACTTACTGTTTACTTGTTTACTTAAAAAATTGCTTGGGAACTTTTTATATTAGGCTCAGTTTTTGCTGAGGTATCTAAACTGTTATCAGATGACTTGAAAAAGTGTCCCAATCAACCTGAATTCACCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212763 True 2861 TUCP 0.38 2 5562655 5565553

Neighbor

gene id symbol gene type direction distance location
CI01000040_05422744_05511374 SGCD coding downstream 51281 5422605 ~ 5511374 (-)
CI01000040_05290906_05309503 NA coding downstream 253152 5289368 ~ 5309503 (-)
CI01000040_05254119_05259873 UBLCP1 coding downstream 302173 5254066 ~ 5260482 (-)
CI01000040_05246227_05249185 NA coding downstream 313470 5245465 ~ 5249185 (-)
CI01000040_05129482_05130724 ADRB2B coding downstream 431931 5128744 ~ 5130724 (-)
CI01000040_05761106_05766999 NA coding upstream 194404 5759957 ~ 5766999 (-)
CI01000040_05865054_05868808 MRPL22 coding upstream 299444 5864997 ~ 5868808 (-)
CI01000040_05909175_05910454 CNOT8, CNOT7 coding upstream 343161 5908714 ~ 5910454 (-)
CI01000040_05916108_05961765 WWC1 coding upstream 350319 5915872 ~ 5962028 (-)
CI01000040_05977984_05981590 NA coding upstream 412027 5977580 ~ 5982928 (-)
G187345 NA non-coding downstream 38862 5522596 ~ 5523793 (-)
G187390 NA non-coding downstream 160052 5402240 ~ 5402603 (-)
G187388 NA non-coding downstream 161650 5400738 ~ 5401005 (-)
G187376 NA non-coding downstream 171690 5390700 ~ 5390965 (-)
G187338 NA non-coding downstream 312866 5249571 ~ 5249789 (-)
G187349 NA non-coding upstream 43026 5608579 ~ 5614690 (-)
G187430 NA non-coding upstream 124385 5689938 ~ 5769578 (-)
G187471 NA non-coding upstream 209596 5775149 ~ 5775515 (-)
G187478 NA non-coding upstream 217392 5782945 ~ 5787678 (-)
G187490 NA non-coding upstream 235927 5801480 ~ 5801869 (-)
G187207 NA other downstream 275737 5264193 ~ 5286918 (-)
G185681 NA other downstream 2217775 3344475 ~ 3344880 (-)
G185593 NA other downstream 2569972 2992188 ~ 2992683 (-)
CI01000040_02595281_02596387 FGF1B other downstream 2966231 2594895 ~ 2596728 (-)
G183972 NA other downstream 4729114 833140 ~ 833541 (-)
G188009 NA other upstream 775974 6341527 ~ 6342701 (-)
CI01000040_06423141_06425495 RBMX2 other upstream 857300 6422853 ~ 6425495 (-)
G188226 NA other upstream 1137648 6703201 ~ 6783675 (-)

Expression


Co-expression Network