CI01000046_06095369_06102443


Basic Information

Item Value
gene id CI01000046_06095369_06102443
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 6095023 ~ 6102710 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_06095369_06102443.mRNA
ATGCTAATTAGCATAAGGGCTCACACAGTTCTGTATAATTTAATCTGAGAATGATCACCAAATGAGCACATGCTTCTCCCATGAGAGATAATAAGCACTAGGTCTAATGGGTCTCAAACTTTCCACTTACTGCATTACAACCTCCAAACAACAGTACATTCTCTACCCCAGTTTCTGTGGAGCTTCAGGTGGATATTCACACGCAATTCAGTAAAATACAGCACGAGTAACATAGCTAAGGTAATTGTCTTTATAATATAAGTCGCAATGAACAATACCAGAGCATGTAATAACCCCAAACAGAAGAGAAACAATCATGCGAGGTTAAACAAAAGGTCTTTTGGTCCATTTCAAAAGAGTCTGCGATCGAGCGCGCATCAGAGCCTAACAGCAAACCCGCTGTTACTGCGCCACGCTTTTGATTTCAATGACAGCATAACAATATTTACATGGGGGCTCTGCGTACACACCACGCATGACAATGACTTCACTGTGGAGGAGCACAAACGAATGCATGCGAGTGTCAGGGAACTTACCCAAGTGGCTGCAGCACATAATCAAATTTTAAAACGTGATAAAGATAAAGGCTGCCAGTATGTGGAGAGTCTGACAGGCCAAACATATGGAGGCTACCAGAATGCTGCTGGCACTGAATCTGTGTGTCTGAGCCAGGTGAATGGAGAGCCCTTCATAGATCCACTGCCAGACCAGACACACTCATTAAAGAAGCTGCTGTATTGTGAGTCATTTGAGTCAGCAGCTCTTGTGAACCTCCATGTTTACCAAAGGATGTTTTGGCATATAGCGCGCACGATACAGATTGACTTTGGCCTTTATAGCAATGCTGATCCAGTAAATGGAGTGACAGGATGCAGAAATATACTCGAATGCTCACCAATCACTGAAGACCAGACACAACAAATAAGGGTCATCATTAGCTTAAACAAAACAGATCTGCATATGCTTCATTTTAATGAGGCAGATTTGGCATGGAGCCTGGACACAGTACCAGACAAGACTCAAAAGGGGGAGAAAACATGGGTGCATCTTTGTTTAACAATTATATTTATAAAGTATCAGGGCAGTGAACCTCTGGCACAGCCACAAAAACAGAATATGCAACTATGTCGCCACATATTGCCAGATCCTAGACAACGTTCAAGAACAAACAGATTTGGCAAACGGGCAAAGTTTCTGTATTCTTGCTTGCTTCTCACACCATATGATCTCAGGGTGGAGGGTTTGCCCTTACCTGGCATGCAGCAGAAAGGACTCCCAGAGCGCAGTGTATGGCAGCAGGTTTTAGCAGACTATAGCACACTCAGCACACCAAAAGCAGTGCCAGACATGGCGGCAGGGGGAGACTGGAGGAAACTGGAAGCAACAACACGAGGGGGCCAACCCTCTCCTGAGGACACACACAGGACATATAATATGCTGGTGCCAACCATCAACATTGTGCCAGCTCACCAAAGGAATGCTCTTTTTTCAGCTCAATACAAATTGATGCATTTGTTATGTTTACTTTGTTTCATCTAACAATATAGAAATATATAAGGCTGAAATTTTTATAAGCATTGGAATGTTATTGCAATCCATACAAGATGCTCTAGTCTATTGCATGTTGAGATTCTTTAAAAAAAAAAAAAAAAAAAACATTTGGGTAAACTGCAAAATGATCTTCAACTGACTAGAAATGACTGACTCATATTATTATTATTATTTTTTAATTATTATTAATTAATTACTACTTGATGCTCTCTTCTCAGGTCAGCTGAAGATCATTTTGTAGTTTACCCAAAATGTATTTCTTAAAGAATTTCAACATGCAATAGACTAAAGCATCTGGTATGGATTTCAATAACGTGCCAATGCTCATAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_06095369_06102443.mRNA True 1885 mRNA 0.41 5 6095023 6102710

Neighbor

gene id symbol gene type direction distance location
CI01000046_06054062_06061413 NA coding downstream 33468 6053863 ~ 6061555 (-)
CI01000046_05874697_05877228 NA coding downstream 215446 5874559 ~ 5879577 (-)
CI01000046_05746299_05753388 PSMD11A, PSMD11B, PSMD11 coding downstream 341635 5746299 ~ 5753388 (-)
CI01000046_05718149_05727984 NSFA, NSF coding downstream 367039 5718129 ~ 5727984 (-)
CI01000046_05655039_05668170 TR-ALPHA, THRAA, THRAB, THRA coding downstream 426533 5655039 ~ 5668490 (-)
CI01000046_06165650_06167393 NA coding upstream 62928 6165638 ~ 6167708 (-)
CI01000046_06171463_06172702 DCTN5.S, DCTN5 coding upstream 68296 6171006 ~ 6174632 (-)
CI01000046_06192265_06195160 GNG13B, GNG13 coding upstream 88463 6190292 ~ 6195626 (-)
CI01000046_06223230_06251304 CASKIN1 coding upstream 120069 6222779 ~ 6251304 (-)
CI01000046_06312028_06323678 NA coding upstream 209227 6311530 ~ 6323850 (-)
G199053 NA non-coding downstream 31836 6062680 ~ 6063187 (-)
G198992 NA non-coding downstream 100887 5993828 ~ 5994136 (-)
G198939 NA non-coding downstream 107625 5984940 ~ 5987398 (-)
G198935 NA non-coding downstream 227118 5864689 ~ 5867905 (-)
G199060 NA non-coding upstream 1375 6104085 ~ 6104349 (-)
G199067 NA non-coding upstream 21644 6124354 ~ 6124643 (-)
G199068 NA non-coding upstream 22742 6125452 ~ 6125856 (-)
G199069 NA non-coding upstream 24927 6127637 ~ 6128084 (-)
G199070 NA non-coding upstream 25405 6128115 ~ 6128549 (-)
G198265 NA other downstream 2294922 3665243 ~ 3800101 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 3227229 2866070 ~ 2867794 (-)
G196463 NA other downstream 3926379 2168266 ~ 2168644 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S other downstream 5314730 774434 ~ 780293 (-)
G195098 NA other downstream 5418895 670736 ~ 676128 (-)
G199014 NA other upstream 261468 6364178 ~ 6375406 (-)
G199130 NA other upstream 475270 6577980 ~ 6594210 (-)
G199181 NA other upstream 723975 6826685 ~ 6830453 (-)

Expression


Co-expression Network