CI01000047_04385029_04397861


Basic Information

Item Value
gene id CI01000047_04385029_04397861
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4384547 ~ 4397861 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_04385029_04397861.mRNA
CAGCCTCAGATAATCTTCCCAGCGCTCAGGTGTGTGGAAGAACCACATTTACCACCAGCAGCAGGATAGTAGGAGGTCAGAACGCTTCAGCTGGACGCTGGCCATGGCAGGCTAGCATTCTTCTGTACGGCTATCACTTCTGTGGAGGTTCTCTCATCAACAAAGAGTGGGTGCTGACCGCTGCCCACTGTGTTGAGGGTTATTCCATCTATTCTTTAGGTGTGGTTTTGGGGCGTCAGACCCAGGAAGGCGACAACCCCAATGAAGAGTTTATAGATGTGATGACAATCATCAAACATCCCAGTTACAACTATCTTACAAATGACAATGATATCGCTCTGCTCAAACTGAGATCTCCCGTCAACTTCACTGATTACATCAGCCCCGTGTGTCTAGCAGCTGATGGCAGTGTGTTTAACAACGGCACAGAGAGCTGGATCACTGGATGGGGAAACATTGATGAAGGAGTGTCCCTCCCGTCCCCTAATGTTCTACAGGAAGAGGAGGTTCCTGTAATTGGTAACAGACAGTGCAACTGTCTCTATGGAGTTGGAGAGATAACAGACAACATGATCTGTGCTGGTCTACTGGAGGGAGGCAAGGACTCATGTCAGGTACACAAACCCTGTTCAACTTGTGTTTACAAGGGAGATTCAGGAGGTCCGATGGAACTCCAGATAACTGACCCCATATATTTCCTCAGTCCACCAGCTGTTTCTGCATTTTAACCATTACCTATTTTCTTGATATTTGTATTATATTTACATATATTTGCAACTGTGTTAAGTCAAGCCAACAATTAACTTGATATGATTAGTGGAAAACATTTTGCCTGAATCCAATTTCTAAAAACTCTGACAAAAAACACATATAGAAACAAAGGGAATATAAAAACTGAAATTCGCAGTCGCCATGGATAAAAGGCATTTATAATTAAAGGTTCCAATCTTATTCATTTGTTCAGTCTTGTCAGATATAGAATGCTACAACGACACAAAGGCCCTTTAAGCTTTTGTGAACTAAATTTAATATTGAAGTACTGGTATTAAAGGAAATATTAATGTTGCAAAAGGAAATCTTTTAAGTCACCTTGGAGCACTTGATAAATTAATACATATAATGATGAAAATTAGCAATTATGACTATGCTATTTCTAGTGTTTCATTTAGGGATGTTTTGTATAATTTTCATCTCCTGGGTTTAAAATAAA

Function

NR:

description
Zgc:101788

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_04385029_04397861.mRNA True 1210 mRNA 0.40 5 4384547 4397861

Neighbor

gene id symbol gene type direction distance location
CI01000047_04345335_04375341 NA coding downstream 9113 4345127 ~ 4375434 (-)
CI01000047_04289186_04338565 NA coding downstream 44777 4289063 ~ 4339770 (-)
CI01000047_04285605_04286644 COA3A coding downstream 97853 4285227 ~ 4286694 (-)
CI01000047_04213574_04213976 NA coding downstream 170571 4213409 ~ 4214085 (-)
CI01000047_04137872_04142531 CABP5B, CABP5, CABP5A coding downstream 242016 4137599 ~ 4142531 (-)
CI01000047_04398951_04431817 NA coding upstream 1090 4398951 ~ 4431817 (-)
CI01000047_04458864_04461672 NA coding upstream 60910 4458771 ~ 4462094 (-)
CI01000047_04479638_04501854 NA coding upstream 81380 4479241 ~ 4501973 (-)
CI01000047_04555399_04568166 NA coding upstream 156961 4554822 ~ 4568320 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 coding upstream 177130 4574335 ~ 4576342 (-)
G203143 NA non-coding downstream 164814 4219397 ~ 4219733 (-)
G202991 NA non-coding downstream 207777 4130712 ~ 4176770 (-)
G202997 NA non-coding downstream 289655 4094355 ~ 4094892 (-)
G203085 NA non-coding downstream 290926 4093419 ~ 4093621 (-)
G203084 NA non-coding downstream 291136 4093178 ~ 4093411 (-)
G203189 NA non-coding upstream 10612 4408473 ~ 4408827 (-)
G203191 NA non-coding upstream 22298 4420159 ~ 4425359 (-)
G203204 NA non-coding upstream 104344 4502205 ~ 4502522 (-)
G203217 NA non-coding upstream 138480 4536341 ~ 4536570 (-)
G203219 NA non-coding upstream 147708 4545569 ~ 4546216 (-)
G202944 NA other downstream 398145 3985342 ~ 3986402 (-)
G202733 NA other downstream 1250895 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 2669030 1706068 ~ 1744282 (-)
G203286 NA other upstream 476518 4874379 ~ 4876734 (-)
G203840 NA other upstream 1520647 5918508 ~ 5927344 (-)
G203881 NA other upstream 1645392 6043253 ~ 6043789 (-)

Expression


Co-expression Network