G201156


Basic Information

Item Value
gene id G201156
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2871254 ~ 2871454 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU228232
CTTGTTTCCGCCACAAAAAAATAAAAAATAAAAAAAGGTAATGCCAACTTTTTATTTCACAATTCTGACTTTCTTTCTCACAATTGCGAGTTTATATCTCGCAATTCTGAGAAAAGAAGTCATAATTGCGACATATAAAATCGCAATTGCGCGTTTCAATTCACAAAAAAAACAATTGTTCGCGATTGTGAGATACAAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228232 True 201 lncRNA 0.31 1 2871254 2871454

Neighbor

gene id symbol gene type direction distance location
CI01000047_02779424_02823789 ITGA3, ITGA3B coding upstream 47465 2779424 ~ 2823789 (+)
CI01000047_02738296_02744806 DLX4B coding upstream 126241 2737872 ~ 2745013 (+)
CI01000047_02602977_02614833 MYST2, KAT7B, KAT7 coding upstream 256172 2602977 ~ 2615082 (+)
CI01000047_02581276_02587652 G6PCA.1 coding upstream 281733 2580919 ~ 2589521 (+)
CI01000047_02562428_02569496 AARSD1 coding upstream 300866 2562293 ~ 2570388 (+)
CI01000047_02881833_02887627 NA coding downstream 10379 2881833 ~ 2887744 (+)
CI01000047_02889253_02916373 NA coding downstream 17799 2889253 ~ 2916436 (+)
CI01000047_02945353_02965219 TBC1D12, TBC1D12B coding downstream 73899 2945353 ~ 2965377 (+)
CI01000047_02968461_02978899 NOC3L coding downstream 96944 2968398 ~ 2978943 (+)
CI01000047_03097826_03105348 NA coding downstream 226372 3097826 ~ 3105505 (+)
G200158 NA non-coding upstream 204652 2657992 ~ 2666602 (+)
G200136 NA non-coding upstream 253984 2617010 ~ 2617270 (+)
G200133 NA non-coding upstream 272257 2596436 ~ 2598997 (+)
G200132 NA non-coding upstream 275781 2595150 ~ 2595473 (+)
G200130 NA non-coding upstream 284379 2585450 ~ 2586875 (+)
G201160 NA non-coding downstream 4393 2875847 ~ 2876068 (+)
G201165 NA non-coding downstream 56030 2927484 ~ 2927769 (+)
G201168 NA non-coding downstream 60956 2932410 ~ 2932614 (+)
G201127 NA non-coding downstream 94394 2965848 ~ 2966609 (+)
G201191 NA non-coding downstream 210129 3081583 ~ 3082197 (+)
G200076 NA other upstream 293257 2520596 ~ 2577997 (+)
G200003 NA other upstream 552292 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 1118417 1749606 ~ 1752688 (+)
G199386 NA other upstream 1905798 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 2038644 773429 ~ 832610 (+)
G201186 NA other downstream 147251 3018705 ~ 3088187 (+)
G201387 NA other downstream 825062 3696516 ~ 3701860 (+)
G201599 NA other downstream 1544359 4415813 ~ 4482457 (+)
G202382 NA other downstream 3944263 6815717 ~ 6816118 (+)

Expression


Co-expression Network