G201186


Basic Information

Item Value
gene id G201186
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3018705 ~ 3088187 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU228278
CAGAACGCAGAATCACTCTCTTTTATAACCAAACTGTGTACGAACAGTACAGGACGAACAACCAGATTCTTCTGCTGTGTAAACATGGCCATTCAAATGGGATTTGCCTAATGGGACTGGTTTAGTTTAGGCATTCATCTGGAATTATTATTATTAGCGCTAGGCTAGATCATGCATGTGTTTTCACAATAGCCAGGGTCTGGTTCTCTGCGCTTTCAATTGGCACCCTAACTGCTTAGGTCGATCATCAAGTGCTCGTAAATCTGTGTCTTCCCTTTAAAGCTGGAAGCCAGCAGGAACTCTCTGTTGTCAATGGACACCAGTGAGAATGCCCTCGGCGCCTGGACGTTGAGCTCCTGGAAGTGCACGAACTGGCTCTTCTTGGTGTCCCACTGATAGACCTGGGTTAGCGAGTAGTCGCTGCCTAGGATGGCGTACTGCCAGTTGCCGATGGAGACGGGCTGGAAGACCATGGAGCCCCGGGAGGGCATTGTCTGTATCTCTGTGAACATAGCGCCGTCCCACTTCATCACCTTGGAGTCGCCAATGAAGCGCGTCAGACAGACAAACAGCTCCCCCTTCACCTTAAAGTGTTTGACGGCATAGACGTCCTCCATCTCTGGAATGTCCGTCCGCCTGTCGAACTGCTTCTGGCTTCTGCTCCACTGGTAGATAACGGGCCGCTGTGAGCTGCTAGACAAAATAAGATGGGGTTTGCCGGCGATATCAAGGTACTCGACGTCCGTGTCACGATACCAAGGATGGAGAGACTGGTGCGAGTAGAAGCCATTGCCGTTCCACTTGTACACCGTGGTGGAGCCGGCCTTCGAGCTGTCCGCTATCACGAAGAAGAACTCGCCGTCCGCTCGGAAAGTCTCAATGTCGTTGGGCTTCCTGATTTTCAGGATGTCGATGTCCTGGATTTTGATGAACTTGTTGGCAGAGTTGTCCCTTTTGTAAATGTGAGAGCCGCCGAAAAGTTGAGCGACTATGATGAAAAGGTGGTTATCGATGACCATCGGCTTGCACACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228278 True 1033 TUCP 0.51 2 3018705 3088187

Neighbor

gene id symbol gene type direction distance location
CI01000047_02968461_02978899 NOC3L coding upstream 39762 2968398 ~ 2978943 (+)
CI01000047_02945353_02965219 TBC1D12, TBC1D12B coding upstream 53328 2945353 ~ 2965377 (+)
CI01000047_02889253_02916373 NA coding upstream 102269 2889253 ~ 2916436 (+)
CI01000047_02881833_02887627 NA coding upstream 130961 2881833 ~ 2887744 (+)
CI01000047_02779424_02823789 ITGA3, ITGA3B coding upstream 194916 2779424 ~ 2823789 (+)
CI01000047_03097826_03105348 NA coding downstream 9639 3097826 ~ 3105505 (+)
CI01000047_03107522_03112233 NA coding downstream 19106 3107293 ~ 3112436 (+)
CI01000047_03132426_03133335 RBP2, RBP4, RBP coding downstream 44085 3132272 ~ 3133429 (+)
CI01000047_03247894_03250323 NA coding downstream 159416 3247603 ~ 3250759 (+)
CI01000047_03332251_03337704 MYL3 coding downstream 243604 3331791 ~ 3338294 (+)
G201127 NA non-coding upstream 52096 2965848 ~ 2966609 (+)
G201168 NA non-coding upstream 86091 2932410 ~ 2932614 (+)
G201165 NA non-coding upstream 90936 2927484 ~ 2927769 (+)
G201160 NA non-coding upstream 142637 2875847 ~ 2876068 (+)
G201156 NA non-coding upstream 147251 2871254 ~ 2871454 (+)
G201234 NA non-coding downstream 48800 3136987 ~ 3139574 (+)
G201236 NA non-coding downstream 56509 3144696 ~ 3150280 (+)
G201250 NA non-coding downstream 77655 3165842 ~ 3166655 (+)
G201243 NA non-coding downstream 78974 3167161 ~ 3170434 (+)
G201245 NA non-coding downstream 88073 3176260 ~ 3178399 (+)
G200076 NA other upstream 440708 2520596 ~ 2577997 (+)
G200003 NA other upstream 699743 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 1265868 1749606 ~ 1752688 (+)
G199386 NA other upstream 2053249 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 2186095 773429 ~ 832610 (+)
G201387 NA other downstream 608329 3696516 ~ 3701860 (+)
G201599 NA other downstream 1327626 4415813 ~ 4482457 (+)
G202382 NA other downstream 3727530 6815717 ~ 6816118 (+)

Expression


Co-expression Network