G204476


Basic Information

Item Value
gene id G204476
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 365002 ~ 366178 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU232093
ATATACGTTTTTACAGCATGTATTAATACTTGAGCAATACAATTGTACCTTGATCATTTCATAGTGCATTAACTAAGGTTAACAGATAAAATAAAAATTAAAACTCAATTTAAAAATGTATTAGAAAATGTTGAAATTAAACTATGAACAATACTTCTACAGTATTTATTAACCTTAGTTAATGTTATAAACTGAATCTTATTGTAAAGTGTTACCATTTCATATCTAAATAGTCATGTTTAAAGATGGACATCTTTAAATATCTACGCAAAGGCCAGAGCATTAAAATAACATAAATGTATATTACATGTATATTCTCACTTTATTTTCTTCTATTTTAGAACACTTGATGATTATCAAAATAACAAAACGTATTGCAGTGATGGAAAAAAAAATCTATTCTATCGAATGCGTTTCTGGGTTGTTTTTGTTTATGGTTCTGTCGGCTGCATGAACATATCAATGTTGAGAAAGCAATCACGTCACTAGCTTTAAATATGCAACTTCGCCAGCTAATAAAAGTGACCAGCTGAATATAAACTAATGCAAACAGATAGTAACAACTGCGACATTAAACATTTGGGTCGGATTTACATGTATTTTTGTCAGCGTTTTAACCGCTTGAGGCACTACTAATGTTAGCGTCCTCTCAGCCTTGACAGCAAACATACTGCTCTTCTTTCTCTGCTAATGCAGCATCTAGTCAACAAATCAATTACTTTATAATGATATGACTCTGTAGTGTTCTGTGTTCATACCGTTTCACTGTCTGTTTTAAACGCGCATCTGATGTGCTCTCAGTGCTGATTAGTGCTCTCCGTGCCGTGTGCAGCCTCATGTGTTTAAATAAACAACACGAGGTGTCAGTAATAGTTTTTATTTCACCTCTAGAGGCCGCTCTTGTTCTGTGTAATGACAGTAGACCTTCTCAGCGCTCATGTTTTGTGTAATGATAGTGCATCATTCTCAACTGCTCCAGCAACGGACACAACCCGGAAAAACTATCGGTATGGATTTTTGCCGATAACCGATTGTTCCACCAATCAACTATCGGTGCCGATTAATCTGCAAAACCGATGAATCGGTCGACCTCTAGTTGTCATAACCTTATTTATTACAATATAAGTGAAAGGCATACGGAACGCTTCATTGATGCCTTAAATACGGAACGATTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232093 True 1177 lncRNA 0.35 1 365002 366178

Neighbor

gene id symbol gene type direction distance location
CI01000048_00261577_00264226 NA coding upstream 99460 261400 ~ 265542 (+)
CI01000048_00149401_00154452 NA coding upstream 210550 149401 ~ 154452 (+)
CI01000048_00036432_00113057 PSIP1 coding upstream 251945 36432 ~ 113057 (+)
CI01000048_00005001_00005627 NA coding upstream 358985 5001 ~ 6017 (+)
CI01000048_00403297_00404487 NA coding downstream 37054 403232 ~ 404614 (+)
CI01000048_00425103_00519682 NA coding downstream 58925 425103 ~ 519890 (+)
CI01000048_00567988_00568484 NA coding downstream 201810 567988 ~ 569052 (+)
CI01000048_00659494_00667971 NA coding downstream 292844 659022 ~ 670072 (+)
CI01000048_00693752_00694265 NA coding downstream 326894 693072 ~ 694474 (+)
G204475 NA non-coding upstream 16 364767 ~ 364986 (+)
G204474 NA non-coding upstream 351 364313 ~ 364651 (+)
G204473 NA non-coding upstream 843 362738 ~ 364159 (+)
G204471 NA non-coding upstream 4038 360695 ~ 360964 (+)
G204470 NA non-coding upstream 4417 358198 ~ 360585 (+)
G204477 NA non-coding downstream 24 366202 ~ 366610 (+)
G204478 NA non-coding downstream 4933 371111 ~ 371387 (+)
G204479 NA non-coding downstream 6091 372269 ~ 372506 (+)
G204480 NA non-coding downstream 8647 374825 ~ 375072 (+)
G204481 NA non-coding downstream 9165 375343 ~ 375670 (+)
G204472 NA other upstream 3341 361025 ~ 361661 (+)
G204409 NA other upstream 79255 285270 ~ 285747 (+)
G204233 NA other upstream 301405 63188 ~ 63597 (+)
G204824 NA other downstream 627277 993455 ~ 993969 (+)
CI01000048_01214358_01215546 NA other downstream 848194 1214358 ~ 1215807 (+)
G205026 NA other downstream 1016777 1382955 ~ 1383698 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location