G204484


Basic Information

Item Value
gene id G204484
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 378854 ~ 380617 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU232101
GTACAGCGAATGTGTGTTTCAATTTTAAGTGACAGACAGCATCCCCTGTATTATGAGTTCCAGCTCCTTCCTTCTAACCAGCGGTTTAGAATATCACAGTGTACAACAAAGCGGTACAAGTACAGCTTTGTCTCAGTAGTGATTAAGCTTTTGAATAGTAACAGGATGAAGTAATGTGTTTATTTATTACAATGTTTTAGTGTTTAGTGTTGTTTTTAGTATTTCGCTGTATAGCTTGTCTACGGTATTGTTTATATGTATGGGAAATAGCCTGAACTTGTTTACTGAAACCTAATTTACAGACAGGTATAAAATAGGGGTGTCGCAATATACCGGTATTGATGATAATCGTGATATTCAAAGCATGAAATATCGACATCGTGTTAATTTAGGGTGTGACAATATACCGGTATTGGTGATAACCGCAATATTTAAAATGAATAGGACTCTTATGATATCATGACATGTAAATACTCCAGCACCAGTACCTGGTTGACCTCTCAGGTGGAAGTATTGCACCTTAACGCTGACACCTGTCAAACAAGAAGACGACGCAGCACGCGCAGCTATTCTGAGAAAGAACCATGTCGTCCGAGCAGGAGAGCGAGAGGCTCTGTCCACACCCGAATAAAGTAAGCTCGACAGTATGGGAGTTTTTCGGCTTCAAAGAAAACACTCTGCAGAATTTGCCTGGCTACATCAGTGCGAAGGGTGGCAACACCACCAACCTTTTTACCCACCTCTGTGTCTATCACCCTGCGGATTACGCCATTTTATAGAGAGTTGCGATTATTTTACAAGTCATGGAATGGGAAATGTTAGGCTATATTAACCTGTTAACAGCGATTTTCTGTGTTCATGTATTTAAATAAATAAATTATTATTTTAATAAGTACCGTGTTTTCTTTACTCATCTTACTCAGCGTGATGTAGCTATGCATGCAGTTATATACCCTGAAATTCAAGATATCATTTTATTTGATTGGTATAATGTATAGGCTACTAGGCTAGTATTAATTTTTGTTTCTTTGGGTCTTAAAAGGCCTTAAATTTGACTTAAAAAAAAAAACTGTGCAGCAACCCTGAAAAAGAAAAACTAAATAAACAAAGTAAAAATTAATTTGACTGATACATCGATAATCGTTTTATCATCGCAGCCCTCCGAATCGTAATTGAATCGAATCATGAGGTGCCTAGAGATTCCCACCCCTAGTCCACGAGGGTATGTAAAAACATAAGTTGGCAGGCAGGTAGGACCGTGTTATTCAAACTGACTAAGTCACTGAAATAAGGCCACAAAACAAATACTAAATGTGTGTCCACAAGACTTCTGGGTACTGAATGTAGAAGCCTAGAATTTTTGCTTCACAATGATGTGAAAATTAGGGCTGTCATGATTCCTCAATTAAATGTGAGTATTCGATTTCAAAAAAAAAAAAAAAAAAATCAATTTGTCTGTGTCAAGTAACCGGCAAAGTACCGGAAGTGGTGCTTTCCATGGACGAGAATCCATGAAATGCTTTATTAGACCGTTTTCTAAGGCTGCACGATATTAAACCCGTTTAAAATCATTATAAAGCATAAGGCTATTGTGAATTTACAAAGGCTGTGATTCAAGTAAATGTATGTGCTTCAGGTTTTTATATACATGCGCTGTAATTATTTACATGCGTGTAGTAGGGCTGGGCGATATGTAAAAAATATTTTATCGATAATCGCCTTAAAAAATATTGCGATATCCGATAATATCGTCTACCCGAGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232101 True 1764 lncRNA 0.37 1 378854 380617

Neighbor

gene id symbol gene type direction distance location
CI01000048_00261577_00264226 NA coding upstream 113312 261400 ~ 265542 (+)
CI01000048_00149401_00154452 NA coding upstream 224402 149401 ~ 154452 (+)
CI01000048_00036432_00113057 PSIP1 coding upstream 265797 36432 ~ 113057 (+)
CI01000048_00005001_00005627 NA coding upstream 372837 5001 ~ 6017 (+)
CI01000048_00403297_00404487 NA coding downstream 22615 403232 ~ 404614 (+)
CI01000048_00425103_00519682 NA coding downstream 44486 425103 ~ 519890 (+)
CI01000048_00567988_00568484 NA coding downstream 187371 567988 ~ 569052 (+)
CI01000048_00659494_00667971 NA coding downstream 278405 659022 ~ 670072 (+)
CI01000048_00693752_00694265 NA coding downstream 312455 693072 ~ 694474 (+)
G204483 NA non-coding upstream 1559 377003 ~ 377295 (+)
G204482 NA non-coding upstream 2475 376154 ~ 376379 (+)
G204481 NA non-coding upstream 3184 375343 ~ 375670 (+)
G204480 NA non-coding upstream 3782 374825 ~ 375072 (+)
G204479 NA non-coding upstream 6348 372269 ~ 372506 (+)
G204485 NA non-coding downstream 78 380695 ~ 381107 (+)
G204486 NA non-coding downstream 709 381326 ~ 381908 (+)
G204487 NA non-coding downstream 3325 383942 ~ 384147 (+)
G204488 NA non-coding downstream 4137 384754 ~ 385223 (+)
G204489 NA non-coding downstream 4951 385568 ~ 385885 (+)
G204472 NA other upstream 17193 361025 ~ 361661 (+)
G204409 NA other upstream 93107 285270 ~ 285747 (+)
G204233 NA other upstream 315257 63188 ~ 63597 (+)
G204824 NA other downstream 612838 993455 ~ 993969 (+)
CI01000048_01214358_01215546 NA other downstream 833755 1214358 ~ 1215807 (+)
G205026 NA other downstream 1002338 1382955 ~ 1383698 (+)

Expression


Co-expression Network