G204391


Basic Information

Item Value
gene id G204391
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 389948 ~ 391634 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU231994
TAGCTATTTCAACAGTGTCTCGGAAAGTAGGTCAGTTCTTTATAAAATACTCGCTGCAATAAATTGGGTGAAAGGCCGCTTGTACGTAAGAATGAAACAGTCTCTTACCTAGTGCCATCGCCTCGTTGAACTTCAGTATGGCGTTGGATAAGTCTCGTTTTTTCCAAAGAATTTCCCCTTCCAACCAGTATCGTCTCGCTTTGCTTTCCGAATTGAACCACTTGTCAATCAAGCCACTGACAATAACATTTACTCTGAGTCCGTCCACATTTAATTCTCTTGGTGATTTGTTCGTTTTTAAACGACAGCTTCTGCACTCTTTCGTCAAGTCATCTTCCAGACAGCGCTTACAGAAAGTGTGCCCACACACCAAAGACGTCGGTTCCGTTAACAAGCACTTGCAAAGGCGACATGAAAACAAGTCTAAGTTCTGCTCTTCATCTAACTCGTCACTTTCAAAACATCTGTTTTCTGAGTAAGAACCCACGCTTATTGTCTTACTGTCACACTGCTCTTTTGTACGTATCGTATGCGCTATAACTTCAACTAAAACCTGCAATTCATTGGGTCTCAGTGCCTGAAGATTTGCAGCGATGCAGTATGAGTCCAATGCATCGGCTATGCGTCCCCCACGGGCCAGGGCATCAGCTTTCCGCAGACAGAGGCCACGGTCGGTGTACTCAAGCTCGGCTAGCTGAGAGGAATATATCTCCGCGGCCAGATCGAAGTCTCCTGCCCGGCACGCCTCGTCCGCCACCCCGAGCATTTCCGCACACAAACCCGGTGCGGTCGGGTTAGAGAGGTCGTGCACATAATGTTCGGCGTGATTTTGAATCCCAGAATCCATTTTCTGCTACTCCACATGAAATTCTAATTATTTTTAGGAAAGCGGTAAAAAAGGAGCGTATAGGATTCTGTTCGAATGCATGGAATCCAAAATTACATATAACCTGATGCAGTCGTGTTTTCAGTTAATTAACAAAAACCCCACCTTTAATACAACACGATCTCGGAATATTGGCGAAATTCAATATTAAAGGAGACAAGGCTAAATATTTATATACACTCCTCCGGAAAACAATTCATTTCCCATTCACCACTGCTAGGCCCAAGACAACCTTTAAATGACTGGTGGTTCATTTCTCAGTAAAGCAAAAGTAAGGTGTCTAACTTCTGCCAAAATAATACATAACACATCTCGCAATGTTAGCATTTCAAGTTGAAAATTAAAAAAAAAAAAAACAACAAAAAAACGTACGTTTAAAAACTGCAGAAAAGTAGTTCGTTAGGTTTATTTTGAAATCACAAACGAGTATCCAAACACGACGCATTTAATTAAGCAACTGACAAAATAAAAGGTTAAATATGATTTTCACAGATCGACTTTGCTGATGGTGACTTTCGAGACCTCTGTTGAATGAAGCATATTCATGGCCGACGTTTAGATGACCCATCAGTTTTATATAAGACCCGATGTCTCTGGCAGCGGCACTCTGCGTAATCCTCGAGAAGTCTTTCGATCGGAATACCTTTTAAAACGGTCCTTCCCCGGGTCTCTTTTGTTCTGGTCATTCTACAGGATGTCCATGTCTTATACAAGCCACTGGAAACTGTAAATATTAATTACTTGTTTTAGCAGAACCGAGACAGTTGTGACGTTACCATTTGGTCTGCACGGGAAAGTGTG
>TU231993
GCCATCGCCTCGTTGAACTTCAGTATGGCGTTGGATAAGTCTCGTTTTTTCCAAAGAATTTCCCCTTCCAACCAGTATCGTCTCGCTTTGCTTTCCGAATTGAACCACTTGTCAATCAAGCCACTGACAATAACATTTACTCTGAGTCCGTCCACATTTAATTCTCTTGGTGATTTGTTCGTTTTTAAACGACAGCTTCTGCACTCTTTCGTCAAGTCATCTTCCAGACAGCGCTTACAGAAAGTGTGCCCACACACCAAAGACGTCGGTTCCGTTAACAAGCACTTGCAAAGGCGACATGAAAACAAGTCTAAGTTCTGCTCTTCATCTAACTCGTCACTTTCAAAACATCTGTTTTCTGAGTAAGAACCCACGCTTATTGTCTTACTGTCACACTGCTCTTTTGTACGTATCGTATGCGCTATAACTTCAACTAAAACCTGCAATTCATTGGGTCTCAGTGCCTGAAGATTTGCAGCGATGCAGTATGAGTCCAATGCATCGGCTATGCGTCCCCCACGGGCCAGGGCATCAGCTTTCCGCAGACAGAGGCCACGGTCGGTGTACTCAAGCTCGGCTAGCTGAGAGGAATATATCTCCGCGGCCAGATCGAAGTCTCCTGCCCGGCACGCCTCGTCCGCCACCCCGAGCATTTCCGCACACAAACCCGGTGCGGTCGGGTTAGAGAGGTCGTGCACATAATGTTCGGCGTGATTTTGAATCCCAGAATCCATTTTCTGCTACTCCACATGAAATTCTAATTATTTTTAGGAAAGCGGTAAAAAAGGAGCGTATAGGATTCTGTTCGAATGCATGGAATCCAAAATTACATATAACCTGATGCAGTCGTGTTTTCAGTTAATTAACAAAAACCCCACCTTTAATACAACACGATCTCGGAATATTGGCGAAATTCAATATTAAAGGAGACAAGGCTAAATATTTATATACACTCCTCCGGAAAACAATTCATTTCCCATTCACCACTGCTAGGCCCAAGACAACCTTTAAATGACTGGTGGTTCATTTCTCAGTAAAGCAAAAGTAAGGTGTCTAACTTCTGCCAAAATAATACATAACACATCTCGCAATGTTAGCATTTCAAGTTGAAAATTAAAAAAAAAAAAAACAACAAAAAAACGTACGTTTAAAAACTGCAGAAAAGTAGTTCGTTAGGTTTATTTTGAAATCACAAACGAGTATCCAAACACGACGCATTTAATTAAGCAACTGACAAAATAAAAGGTTAAATATGATTTTCACAGATCGACTTTGCTGATGGTGACTTTCGAGACCTCTGTTGAATGAAGCATATTCATGGCCGACGTTTAGATGACCCATCAGTTTTATATAAGACCCGATGTCTCTGGCAGCGGCACTCTGCGTAATCCTCGAGAAGTCTTTCGATCGGAATACCTTTTAAAACGGTCCTTCCCCGGGTCTCTTTTGTTCTGGTCATTCTACAGGATGTCCATGTCTTATACAAGCCACTGGAAACTGTAAATATTAATTACTTGTTTTAGCAGAACCGAGACAGTTGTGACGTTACCATTTGGTCTGCACGGGAAAGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231994 False 1687 lncRNA 0.42 1 389948 391634
TU231993 True 1574 lncRNA 0.42 1 390061 391634

Neighbor

gene id symbol gene type direction distance location
CI01000048_00261577_00264226 NA coding upstream 124406 261400 ~ 265542 (+)
CI01000048_00149401_00154452 NA coding upstream 235496 149401 ~ 154452 (+)
CI01000048_00036432_00113057 PSIP1 coding upstream 276891 36432 ~ 113057 (+)
CI01000048_00005001_00005627 NA coding upstream 383931 5001 ~ 6017 (+)
CI01000048_00403297_00404487 NA coding downstream 11598 403232 ~ 404614 (+)
CI01000048_00425103_00519682 NA coding downstream 33469 425103 ~ 519890 (+)
CI01000048_00567988_00568484 NA coding downstream 176354 567988 ~ 569052 (+)
CI01000048_00659494_00667971 NA coding downstream 267388 659022 ~ 670072 (+)
CI01000048_00693752_00694265 NA coding downstream 301438 693072 ~ 694474 (+)
G204492 NA non-coding upstream 1469 387597 ~ 388479 (+)
G204491 NA non-coding upstream 2674 386953 ~ 387274 (+)
G204490 NA non-coding upstream 3374 385959 ~ 386574 (+)
G204489 NA non-coding upstream 4063 385568 ~ 385885 (+)
G204488 NA non-coding upstream 4725 384754 ~ 385223 (+)
G204502 NA non-coding downstream 17223 408857 ~ 409070 (+)
G204503 NA non-coding downstream 17638 409272 ~ 409550 (+)
G204461 NA non-coding downstream 40693 432327 ~ 482248 (+)
G204454 NA non-coding downstream 73269 464903 ~ 466805 (+)
G204472 NA other upstream 28287 361025 ~ 361661 (+)
G204409 NA other upstream 104201 285270 ~ 285747 (+)
G204233 NA other upstream 326351 63188 ~ 63597 (+)
G204824 NA other downstream 601821 993455 ~ 993969 (+)
CI01000048_01214358_01215546 NA other downstream 822738 1214358 ~ 1215807 (+)
G205026 NA other downstream 991321 1382955 ~ 1383698 (+)

Expression


Co-expression Network